Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.98□□□□□ -1.61
RCCD1A6NED2 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RCCD1A6NED2 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RCCD1A6NED2 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RCCD1A6NED2 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RCCD1A6NED2 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RCCD1A6NED2 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.97□□□□□ -1.61
RCCD1A6NED2 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
RCCD1A6NED2 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RCCD1A6NED2 RNU6-1082P-201ENST00000364574 107 ntBASIC4.97□□□□□ -1.61
RCCD1A6NED2 SNORA40.5-201ENST00000391061 128 ntBASIC4.97□□□□□ -1.61
RCCD1A6NED2 HDGFP1-201ENST00000405943 252 ntBASIC4.97□□□□□ -1.61
RCCD1A6NED2 RNA5SP201-201ENST00000410316 124 ntBASIC4.97□□□□□ -1.61
RCCD1A6NED2 RNA5SP504-201ENST00000410676 117 ntBASIC4.97□□□□□ -1.61
RCCD1A6NED2 RNA5SP146-201ENST00000410743 123 ntBASIC4.97□□□□□ -1.61
RCCD1A6NED2 AC245047.4-201ENST00000433189 144 ntBASIC4.97□□□□□ -1.61
RCCD1A6NED2 RPS29P2-201ENST00000479278 136 ntBASIC4.97□□□□□ -1.61
RCCD1A6NED2 Y_RNA.692-201ENST00000516627 105 ntBASIC4.97□□□□□ -1.61
RCCD1A6NED2 IGLV3-26-201ENST00000520756 302 ntBASIC4.97□□□□□ -1.61
RCCD1A6NED2 NDUFA5P6-201ENST00000542110 379 ntBASIC4.97□□□□□ -1.61
RCCD1A6NED2 EIF4A1P12-201ENST00000551910 141 ntBASIC4.97□□□□□ -1.61
RCCD1A6NED2 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RCCD1A6NED2 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.97□□□□□ -1.61
RCCD1A6NED2 AC108081.1-201ENST00000604358 221 ntBASIC4.97□□□□□ -1.61
RCCD1A6NED2 MIR7155-201ENST00000615925 56 ntBASIC4.97□□□□□ -1.61
RCCD1A6NED2 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.97□□□□□ -1.61
RCCD1A6NED2 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
RCCD1A6NED2 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RCCD1A6NED2 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
RCCD1A6NED2 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.97□□□□□ -1.61
RCCD1A6NED2 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.96□□□□□ -1.61
RCCD1A6NED2 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.96□□□□□ -1.61
RCCD1A6NED2 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.96□□□□□ -1.61
RCCD1A6NED2 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RCCD1A6NED2 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.96□□□□□ -1.62
RCCD1A6NED2 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
RCCD1A6NED2 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RCCD1A6NED2 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RCCD1A6NED2 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RCCD1A6NED2 U8.4-201ENST00000363626 134 ntBASIC4.96□□□□□ -1.62
RCCD1A6NED2 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
RCCD1A6NED2 SNORA1.3-201ENST00000384676 136 ntBASIC4.96□□□□□ -1.62
RCCD1A6NED2 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
RCCD1A6NED2 SNORA79-201ENST00000408376 140 ntBASIC4.96□□□□□ -1.62
RCCD1A6NED2 RNU6-383P-201ENST00000410864 94 ntBASIC4.96□□□□□ -1.62
RCCD1A6NED2 HSPE1P21-201ENST00000438283 308 ntBASIC4.96□□□□□ -1.62
RCCD1A6NED2 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.96□□□□□ -1.62
RCCD1A6NED2 AL670379.3-201ENST00000605040 251 ntBASIC4.96□□□□□ -1.62
RCCD1A6NED2 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
RCCD1A6NED2 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RCCD1A6NED2 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RCCD1A6NED2 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.96□□□□□ -1.62
RCCD1A6NED2 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.96□□□□□ -1.62
RCCD1A6NED2 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RCCD1A6NED2 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
RCCD1A6NED2 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
RCCD1A6NED2 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RCCD1A6NED2 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RCCD1A6NED2 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
RCCD1A6NED2 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RCCD1A6NED2 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RCCD1A6NED2 RNU1-75P-201ENST00000347264 129 ntBASIC4.95□□□□□ -1.62
RCCD1A6NED2 U3.8-201ENST00000363675 217 ntBASIC4.95□□□□□ -1.62
RCCD1A6NED2 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.95□□□□□ -1.62
RCCD1A6NED2 MIR765-201ENST00000390226 114 ntBASIC4.95□□□□□ -1.62
RCCD1A6NED2 AC114755.2-201ENST00000413520 361 ntBASIC4.95□□□□□ -1.62
RCCD1A6NED2 AL139281.1-201ENST00000422120 335 ntBASIC4.95□□□□□ -1.62
RCCD1A6NED2 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.95□□□□□ -1.62
RCCD1A6NED2 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.95□□□□□ -1.62
RCCD1A6NED2 MIR378D2-201ENST00000580636 98 ntBASIC4.95□□□□□ -1.62
RCCD1A6NED2 AC120024.3-201ENST00000603167 156 ntBASIC4.95□□□□□ -1.62
RCCD1A6NED2 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.95□□□□□ -1.62
RCCD1A6NED2 FAM27B-201ENST00000610601 213 ntBASIC4.95□□□□□ -1.62
RCCD1A6NED2 MIR3199-2-201ENST00000636243 86 ntBASIC4.95□□□□□ -1.62
RCCD1A6NED2 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
RCCD1A6NED2 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
RCCD1A6NED2 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.95□□□□□ -1.62
RCCD1A6NED2 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RCCD1A6NED2 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.95□□□□□ -1.62
RCCD1A6NED2 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RCCD1A6NED2 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
RCCD1A6NED2 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RCCD1A6NED2 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RCCD1A6NED2 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RCCD1A6NED2 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RCCD1A6NED2 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.94□□□□□ -1.62
RCCD1A6NED2 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.94□□□□□ -1.62
RCCD1A6NED2 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.94□□□□□ -1.62
RCCD1A6NED2 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
RCCD1A6NED2 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RCCD1A6NED2 AP002088.1-201ENST00000382740 395 ntBASIC4.94□□□□□ -1.62
RCCD1A6NED2 AIMP1P2-201ENST00000425294 312 ntBASIC4.94□□□□□ -1.62
RCCD1A6NED2 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.94□□□□□ -1.62
RCCD1A6NED2 NDUFS5P3-201ENST00000450668 321 ntBASIC4.94□□□□□ -1.62
RCCD1A6NED2 RN7SL329P-201ENST00000467740 299 ntBASIC4.94□□□□□ -1.62
RCCD1A6NED2 AC084357.1-201ENST00000473404 255 ntBASIC4.94□□□□□ -1.62
RCCD1A6NED2 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.94□□□□□ -1.62
RCCD1A6NED2 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.94□□□□□ -1.62
RCCD1A6NED2 MIR6730-201ENST00000622213 67 ntBASIC4.94□□□□□ -1.62
RCCD1A6NED2 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms