Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 MTND2P20-201ENST00000440805 661 ntBASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 snoU13.14-201ENST00000459372 104 ntBASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 SNORD124-201ENST00000459577 104 ntBASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 AC134050.1-201ENST00000495088 933 ntBASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 RPF2P2-201ENST00000504693 896 ntBASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 RNA5SP503-201ENST00000517047 117 ntBASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 SNORA31.19-201ENST00000517079 126 ntBASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 RNU6-165P-201ENST00000517170 99 ntBASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 AC137800.2-201ENST00000574375 120 ntBASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 AC022432.1-201ENST00000595739 310 ntBASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 AC009229.3-201ENST00000608056 282 ntBASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.38□□□□□ -2.35
TCRBV3S1A0A5B6 Y_RNA.140-201ENST00000363474 103 ntBASIC0.37□□□□□ -2.35
TCRBV3S1A0A5B6 MIR520A-201ENST00000384862 85 ntBASIC0.37□□□□□ -2.35
TCRBV3S1A0A5B6 MIR29B2-201ENST00000385055 81 ntBASIC0.37□□□□□ -2.35
TCRBV3S1A0A5B6 SNORA40C-201ENST00000391285 128 ntBASIC0.37□□□□□ -2.35
TCRBV3S1A0A5B6 Y_RNA.597-201ENST00000410463 100 ntBASIC0.37□□□□□ -2.35
TCRBV3S1A0A5B6 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.37□□□□□ -2.35
TCRBV3S1A0A5B6 AL592045.1-201ENST00000429867 352 ntBASIC0.37□□□□□ -2.35
TCRBV3S1A0A5B6 CBX3P6-201ENST00000430257 527 ntBASIC0.37□□□□□ -2.35
TCRBV3S1A0A5B6 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.37□□□□□ -2.35
TCRBV3S1A0A5B6 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.37□□□□□ -2.35
TCRBV3S1A0A5B6 AC092473.1-201ENST00000441098 221 ntBASIC0.37□□□□□ -2.35
TCRBV3S1A0A5B6 MTND1P30-201ENST00000441241 901 ntBASIC0.37□□□□□ -2.35
TCRBV3S1A0A5B6 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.37□□□□□ -2.35
TCRBV3S1A0A5B6 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.37□□□□□ -2.35
TCRBV3S1A0A5B6 RNU6-333P-201ENST00000459117 107 ntBASIC0.37□□□□□ -2.35
TCRBV3S1A0A5B6 RPL37P6-201ENST00000460682 294 ntBASIC0.37□□□□□ -2.35
TCRBV3S1A0A5B6 TRBVA-201ENST00000498804 316 ntBASIC0.37□□□□□ -2.35
TCRBV3S1A0A5B6 PDCD5P2-201ENST00000507570 312 ntBASIC0.37□□□□□ -2.35
TCRBV3S1A0A5B6 RNU4-57P-201ENST00000515980 135 ntBASIC0.37□□□□□ -2.35
TCRBV3S1A0A5B6 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.37□□□□□ -2.35
TCRBV3S1A0A5B6 OR6C7P-201ENST00000547875 934 ntBASIC0.37□□□□□ -2.35
TCRBV3S1A0A5B6 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.37□□□□□ -2.35
TCRBV3S1A0A5B6 MIR4789-201ENST00000577469 82 ntBASIC0.37□□□□□ -2.35
TCRBV3S1A0A5B6 BNIP3P30-201ENST00000601184 574 ntBASIC0.37□□□□□ -2.35
TCRBV3S1A0A5B6 AC090578.1-201ENST00000604955 591 ntBASIC0.37□□□□□ -2.35
TCRBV3S1A0A5B6 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.37□□□□□ -2.35
TCRBV3S1A0A5B6 MIR96-201ENST00000362288 78 ntBASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 snoU2_19.1-201ENST00000362361 80 ntBASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 RNU6-858P-201ENST00000362436 107 ntBASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 RNU6-942P-201ENST00000363002 107 ntBASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 SNORD114-24-201ENST00000365029 72 ntBASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 Y_RNA.332-201ENST00000365271 113 ntBASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 RNU6-487P-201ENST00000365430 104 ntBASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 RNU6-166P-201ENST00000384371 107 ntBASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 UBE2V1P10-201ENST00000414685 269 ntBASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 AC114737.2-201ENST00000421583 173 ntBASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 SEPT7P5-201ENST00000434048 306 ntBASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 AC099677.2-201ENST00000436385 175 ntBASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 GTF2IP13-201ENST00000438487 386 ntBASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 MTCO2P25-201ENST00000447065 681 ntBASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 TRMT112P2-201ENST00000512910 132 ntBASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 RNU4-54P-201ENST00000516428 129 ntBASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 RNA5SP121-201ENST00000516537 101 ntBASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 RN7SKP49-201ENST00000516675 260 ntBASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 SNORA76.2-201ENST00000517095 137 ntBASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 SNORA70.22-201ENST00000517160 124 ntBASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 CYP3A137P-201ENST00000562436 69 ntBASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 HMGB1P33-201ENST00000563485 527 ntBASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 AC122134.1-202ENST00000569111 1201 ntBASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 MTCYBP33-201ENST00000575007 1130 ntBASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 BNIP3P16-201ENST00000589779 534 ntBASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 AC005332.6-201ENST00000613178 446 ntBASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 AC063943.3-201ENST00000615562 356 ntBASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 AL157770.1-201ENST00000623049 439 ntBASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 MIR3529-201ENST00000637713 78 ntBASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
TCRBV3S1A0A5B6 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
TCRBV3S1A0A5B6 SNORD65.1-201ENST00000390889 71 ntBASIC0.35□□□□□ -2.35
TCRBV3S1A0A5B6 RNU6-482P-201ENST00000391068 107 ntBASIC0.35□□□□□ -2.35
TCRBV3S1A0A5B6 RNU2-23P-201ENST00000410545 195 ntBASIC0.35□□□□□ -2.35
TCRBV3S1A0A5B6 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.35□□□□□ -2.35
TCRBV3S1A0A5B6 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.35□□□□□ -2.35
TCRBV3S1A0A5B6 AC016831.2-201ENST00000417179 352 ntBASIC0.35□□□□□ -2.35
TCRBV3S1A0A5B6 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.35□□□□□ -2.35
TCRBV3S1A0A5B6 AC244023.1-201ENST00000426884 112 ntBASIC0.35□□□□□ -2.35
TCRBV3S1A0A5B6 AC092628.1-201ENST00000436250 252 ntBASIC0.35□□□□□ -2.35
TCRBV3S1A0A5B6 AL606517.1-201ENST00000446914 387 ntBASIC0.35□□□□□ -2.35
TCRBV3S1A0A5B6 MTND1P31-201ENST00000449206 961 ntBASIC0.35□□□□□ -2.35
TCRBV3S1A0A5B6 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.35□□□□□ -2.35
TCRBV3S1A0A5B6 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.35□□□□□ -2.35
TCRBV3S1A0A5B6 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
TCRBV3S1A0A5B6 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.35□□□□□ -2.35
TCRBV3S1A0A5B6 COX6CP6-201ENST00000490840 228 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms