Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
PCDHB11Q9Y5F2 AC106871.1-201ENST00000568324 3102 ntBASIC4.59□□□□□ -1.68
PCDHB11Q9Y5F2 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.59□□□□□ -1.68
PCDHB11Q9Y5F2 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PCDHB11Q9Y5F2 RNU1-64P-201ENST00000365443 163 ntBASIC4.58□□□□□ -1.68
PCDHB11Q9Y5F2 SNORA18.3-201ENST00000384122 132 ntBASIC4.58□□□□□ -1.68
PCDHB11Q9Y5F2 RPL21P17-201ENST00000397467 475 ntBASIC4.58□□□□□ -1.68
PCDHB11Q9Y5F2 RN7SKP267-201ENST00000410381 285 ntBASIC4.58□□□□□ -1.68
PCDHB11Q9Y5F2 U8.19-201ENST00000459095 133 ntBASIC4.58□□□□□ -1.68
PCDHB11Q9Y5F2 AC006517.1-201ENST00000480485 328 ntBASIC4.58□□□□□ -1.68
PCDHB11Q9Y5F2 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.58□□□□□ -1.68
PCDHB11Q9Y5F2 RN7SKP164-201ENST00000516138 266 ntBASIC4.58□□□□□ -1.68
PCDHB11Q9Y5F2 RNU6-436P-201ENST00000516171 114 ntBASIC4.58□□□□□ -1.68
PCDHB11Q9Y5F2 AL110118.1-201ENST00000553543 400 ntBASIC4.58□□□□□ -1.68
PCDHB11Q9Y5F2 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHB11Q9Y5F2 AC005520.5-201ENST00000613926 164 ntBASIC4.58□□□□□ -1.68
PCDHB11Q9Y5F2 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.58□□□□□ -1.68
PCDHB11Q9Y5F2 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
PCDHB11Q9Y5F2 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHB11Q9Y5F2 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHB11Q9Y5F2 MAPK10-349ENST00000641767 3661 ntBASIC4.58□□□□□ -1.68
PCDHB11Q9Y5F2 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHB11Q9Y5F2 AC068254.2-201ENST00000623938 3577 ntBASIC4.58□□□□□ -1.68
PCDHB11Q9Y5F2 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHB11Q9Y5F2 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHB11Q9Y5F2 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 AC007656.2-201ENST00000624902 4547 ntBASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 SNORD113.2-201ENST00000364166 89 ntBASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 Y_RNA.273-201ENST00000364703 102 ntBASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 SNORA71.2-201ENST00000364941 134 ntBASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 RNU6-215P-201ENST00000365169 102 ntBASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 RNU6-1264P-201ENST00000383891 107 ntBASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 SNORA70F-201ENST00000384142 135 ntBASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 U3.26-201ENST00000391236 204 ntBASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 PTMAP5-201ENST00000393073 333 ntBASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 AL590762.2-201ENST00000395798 571 ntBASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 MIR208B-201ENST00000401172 77 ntBASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 U3.40-201ENST00000408706 208 ntBASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 AC099548.1-201ENST00000421443 426 ntBASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 BPY2DP-201ENST00000422208 265 ntBASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 AC079168.2-201ENST00000453977 416 ntBASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 ACA59.2-201ENST00000517061 156 ntBASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 MIR4431-201ENST00000579990 94 ntBASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 AC233702.9-201ENST00000581528 203 ntBASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 AC090616.3-201ENST00000582184 217 ntBASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 MIR3136-201ENST00000583498 78 ntBASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 SNRPGP20-201ENST00000604477 205 ntBASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 BMS1P21-201ENST00000634565 365 ntBASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 SNORD98-201ENST00000636377 67 ntBASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 OR56B2P-202ENST00000641377 2453 ntBASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHB11Q9Y5F2 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 AC000123.3-201ENST00000624029 4975 ntBASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 AC002543.1-201ENST00000299783 1954 ntBASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 RNU6-50P-201ENST00000362356 103 ntBASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 RNA5SP447-201ENST00000363749 119 ntBASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 Y_RNA.353-201ENST00000365440 108 ntBASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 MIR129-1-201ENST00000384972 72 ntBASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 EI24P2-201ENST00000397776 1076 ntBASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 Z98745.1-201ENST00000402553 494 ntBASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 RPL23AP1-201ENST00000428990 471 ntBASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 RNA5SP468-201ENST00000516782 93 ntBASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 AC006199.1-201ENST00000548728 219 ntBASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 AC004825.2-201ENST00000616634 455 ntBASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 USP8P1-201ENST00000494673 3183 ntBASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHB11Q9Y5F2 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHB11Q9Y5F2 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHB11Q9Y5F2 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHB11Q9Y5F2 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHB11Q9Y5F2 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms