Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 AC004158.1-201ENST00000564508 4319 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 SMG1P6-201ENST00000532337 2930 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 SNORD115-14-201ENST00000363090 81 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 RNU6-624P-201ENST00000363411 107 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 RNU6-324P-201ENST00000363957 106 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 RNU6-340P-201ENST00000364005 107 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 RNA5SP515-201ENST00000364570 118 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 RNU6-686P-201ENST00000364839 107 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 SNORA5.1-201ENST00000384275 131 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 RNU6-1241P-201ENST00000384536 107 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 MIR578-201ENST00000384828 96 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 Y_RNA.587-201ENST00000391210 103 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 MIR298-201ENST00000401212 88 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 AL096701.2-201ENST00000416920 238 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 BX510359.2-201ENST00000417920 305 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 AC138623.1-201ENST00000418060 216 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 AL117339.3-201ENST00000418733 162 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 USP9YP7-201ENST00000436723 430 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 AL161932.1-201ENST00000437408 146 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 AC016831.4-201ENST00000438302 307 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 CYCSP32-201ENST00000440548 321 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 RPL23AP93-201ENST00000440847 484 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 USP9YP32-201ENST00000452432 430 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 AC103975.1-201ENST00000482506 483 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 AC073073.1-201ENST00000493920 463 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 AC145146.1-201ENST00000496370 254 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 AC111193.1-201ENST00000504097 155 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 APOOP4-201ENST00000513530 597 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 RNU6-1299P-201ENST00000516316 100 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 AC022695.1-201ENST00000522089 237 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 CYCSP29-201ENST00000533731 318 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 AC018448.1-201ENST00000552843 316 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 AC103996.1-201ENST00000555468 102 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 AC040958.1-201ENST00000561102 201 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 CYCSP40-201ENST00000575927 294 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 MIR4782-201ENST00000577987 79 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 SNORA74C-1-201ENST00000580726 201 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 RN7SL690P-201ENST00000582087 240 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 MIR4484-201ENST00000582855 83 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 SNORD39.3-201ENST00000584451 71 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 AL020997.2-201ENST00000602607 184 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC1.59□□□□□ -2.15
KRTAP4-3Q9BYR4 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP4-3Q9BYR4 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC1.59□□□□□ -2.16
KRTAP4-3Q9BYR4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP4-3Q9BYR4 LYST-202ENST00000389794 12985 ntTSL 5 BASIC1.59□□□□□ -2.16
KRTAP4-3Q9BYR4 ADAM3A-203ENST00000461344 2157 ntBASIC1.59□□□□□ -2.16
KRTAP4-3Q9BYR4 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP4-3Q9BYR4 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP4-3Q9BYR4 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP4-3Q9BYR4 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
KRTAP4-3Q9BYR4 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP4-3Q9BYR4 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.16
KRTAP4-3Q9BYR4 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC1.59□□□□□ -2.16
KRTAP4-3Q9BYR4 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC1.59□□□□□ -2.16
KRTAP4-3Q9BYR4 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP4-3Q9BYR4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP4-3Q9BYR4 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP4-3Q9BYR4 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP4-3Q9BYR4 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-3Q9BYR4 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-3Q9BYR4 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC1.58□□□□□ -2.16
KRTAP4-3Q9BYR4 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-3Q9BYR4 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-3Q9BYR4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-3Q9BYR4 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-3Q9BYR4 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-3Q9BYR4 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-3Q9BYR4 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
KRTAP4-3Q9BYR4 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-3Q9BYR4 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
KRTAP4-3Q9BYR4 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-3Q9BYR4 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-3Q9BYR4 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-3Q9BYR4 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-3Q9BYR4 AC004656.1-201ENST00000568479 4951 ntBASIC1.58□□□□□ -2.16
KRTAP4-3Q9BYR4 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-3Q9BYR4 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
KRTAP4-3Q9BYR4 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
KRTAP4-3Q9BYR4 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms