Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.04□□□□□ -1.92
HERPUD2Q9BSE4 RNU2-23P-201ENST00000410545 195 ntBASIC3.04□□□□□ -1.92
HERPUD2Q9BSE4 RNU2-63P-201ENST00000410792 194 ntBASIC3.04□□□□□ -1.92
HERPUD2Q9BSE4 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.04□□□□□ -1.92
HERPUD2Q9BSE4 ERLEC1P1-201ENST00000433806 578 ntBASIC3.04□□□□□ -1.92
HERPUD2Q9BSE4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.04□□□□□ -1.92
HERPUD2Q9BSE4 RPL21P2-201ENST00000440049 481 ntBASIC3.04□□□□□ -1.92
HERPUD2Q9BSE4 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.04□□□□□ -1.92
HERPUD2Q9BSE4 RNU6-1208P-201ENST00000459588 107 ntBASIC3.04□□□□□ -1.92
HERPUD2Q9BSE4 AC087884.1-201ENST00000469738 328 ntBASIC3.04□□□□□ -1.92
HERPUD2Q9BSE4 AK3P2-201ENST00000507976 429 ntBASIC3.04□□□□□ -1.92
HERPUD2Q9BSE4 RNA5SP76-201ENST00000516277 87 ntBASIC3.04□□□□□ -1.92
HERPUD2Q9BSE4 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.04□□□□□ -1.92
HERPUD2Q9BSE4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.04□□□□□ -1.92
HERPUD2Q9BSE4 AC135507.2-201ENST00000612443 309 ntBASIC3.04□□□□□ -1.92
HERPUD2Q9BSE4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 RNU1-35P-201ENST00000362782 153 ntBASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 RNU6-428P-201ENST00000362942 107 ntBASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 RNY3P3-201ENST00000363816 102 ntBASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 MIR544A-201ENST00000384855 91 ntBASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 MIR514A2-201ENST00000385131 88 ntBASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 MIR514A3-201ENST00000385132 88 ntBASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 RNU6-293P-201ENST00000411259 106 ntBASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 RPL39P29-201ENST00000447779 157 ntBASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 CYP2C59P-201ENST00000457790 269 ntBASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 RNU2-53P-201ENST00000516257 147 ntBASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 RN7SKP272-201ENST00000516988 232 ntBASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 AC087854.1-201ENST00000519706 414 ntBASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 RNU6-323P-201ENST00000521915 107 ntBASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 RPL30P11-203ENST00000598995 310 ntBASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 RNU6-89P-201ENST00000606519 100 ntBASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 AL357078.3-201ENST00000607528 618 ntBASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 AC073869.6-201ENST00000640656 341 ntBASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 AC027514.1-201ENST00000588561 1603 ntBASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.03□□□□□ -1.92
HERPUD2Q9BSE4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 SNORA71.1-201ENST00000364523 117 ntBASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 RNA5SP125-201ENST00000364843 120 ntBASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 RNA5SP240-201ENST00000365355 128 ntBASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 RNU6-827P-201ENST00000365553 106 ntBASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 Y_RNA.450-201ENST00000384198 113 ntBASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 RNU6-1072P-201ENST00000384703 107 ntBASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 RNU6-443P-201ENST00000384780 107 ntBASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 SNORA26.7-201ENST00000391288 122 ntBASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 UBA52P6-201ENST00000399822 382 ntBASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 AF274854.1-201ENST00000413236 615 ntBASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 AC007969.2-201ENST00000441891 191 ntBASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 AC090515.1-201ENST00000465295 476 ntBASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 AC117503.1-201ENST00000472241 394 ntBASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 AC097462.2-201ENST00000504623 481 ntBASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 SNORA19.2-201ENST00000516013 114 ntBASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 COPS8P3-201ENST00000526024 482 ntBASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 AC078814.3-201ENST00000553036 491 ntBASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 AC093732.2-201ENST00000607950 274 ntBASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
HERPUD2Q9BSE4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.01□□□□□ -1.93
HERPUD2Q9BSE4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.01□□□□□ -1.93
HERPUD2Q9BSE4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HERPUD2Q9BSE4 AC000403.1-201ENST00000613696 3585 ntBASIC3.01□□□□□ -1.93
HERPUD2Q9BSE4 RNU6-655P-201ENST00000362858 107 ntBASIC3.01□□□□□ -1.93
HERPUD2Q9BSE4 RNU6-529P-201ENST00000363383 104 ntBASIC3.01□□□□□ -1.93
HERPUD2Q9BSE4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HERPUD2Q9BSE4 EIF4E2P1-201ENST00000393781 255 ntBASIC3.01□□□□□ -1.93
HERPUD2Q9BSE4 RNU4-26P-201ENST00000410270 107 ntBASIC3.01□□□□□ -1.93
HERPUD2Q9BSE4 RN7SKP58-201ENST00000411010 305 ntBASIC3.01□□□□□ -1.93
HERPUD2Q9BSE4 AC022028.1-201ENST00000412054 408 ntBASIC3.01□□□□□ -1.93
HERPUD2Q9BSE4 CYCSP48-201ENST00000417124 323 ntBASIC3.01□□□□□ -1.93
HERPUD2Q9BSE4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.01□□□□□ -1.93
HERPUD2Q9BSE4 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.01□□□□□ -1.93
HERPUD2Q9BSE4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.01□□□□□ -1.93
HERPUD2Q9BSE4 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.01□□□□□ -1.93
HERPUD2Q9BSE4 AC103975.1-201ENST00000482506 483 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms