Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 SNORA26.5-201ENST00000391215 123 ntBASIC5.26□□□□□ -1.57
NKX2-3Q8TAU0 PTMAP2-201ENST00000397627 327 ntBASIC5.26□□□□□ -1.57
NKX2-3Q8TAU0 SDHCP2-201ENST00000398565 501 ntBASIC5.26□□□□□ -1.57
NKX2-3Q8TAU0 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NKX2-3Q8TAU0 AL591034.1-201ENST00000407447 340 ntBASIC5.26□□□□□ -1.57
NKX2-3Q8TAU0 CKS1BP5-201ENST00000434172 273 ntBASIC5.26□□□□□ -1.57
NKX2-3Q8TAU0 AL714022.1-201ENST00000439897 151 ntBASIC5.26□□□□□ -1.57
NKX2-3Q8TAU0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC5.26□□□□□ -1.57
NKX2-3Q8TAU0 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC5.26□□□□□ -1.57
NKX2-3Q8TAU0 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NKX2-3Q8TAU0 Y_RNA.685-201ENST00000516532 108 ntBASIC5.26□□□□□ -1.57
NKX2-3Q8TAU0 MIR5571-201ENST00000577998 113 ntBASIC5.26□□□□□ -1.57
NKX2-3Q8TAU0 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
NKX2-3Q8TAU0 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.26□□□□□ -1.57
NKX2-3Q8TAU0 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NKX2-3Q8TAU0 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NKX2-3Q8TAU0 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NKX2-3Q8TAU0 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.26□□□□□ -1.57
NKX2-3Q8TAU0 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 AC010329.5-201ENST00000623497 2174 ntBASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 MIR331-201ENST00000362302 94 ntBASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 RNU6-873P-201ENST00000363833 107 ntBASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 MIR1271-201ENST00000408537 86 ntBASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 AC007560.1-201ENST00000426912 237 ntBASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 RPS26P2-201ENST00000440331 348 ntBASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 AC243964.1-201ENST00000441814 261 ntBASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 AC012671.1-201ENST00000451912 203 ntBASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 AC006026.2-201ENST00000457376 180 ntBASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 snoU13.24-201ENST00000458998 104 ntBASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 AL591473.1-201ENST00000464297 313 ntBASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 RPL30P12-201ENST00000474666 353 ntBASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 AC146944.2-203ENST00000502493 354 ntBASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 AC091874.1-201ENST00000511402 339 ntBASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 AC139495.1-202ENST00000513164 354 ntBASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 RNU6-436P-201ENST00000516171 114 ntBASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 Y_RNA.692-201ENST00000516627 105 ntBASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 AC133485.4-201ENST00000561835 220 ntBASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 AC138907.4-201ENST00000570107 226 ntBASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 RN7SL176P-201ENST00000580352 264 ntBASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 AC015726.2-201ENST00000620112 122 ntBASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 AC025521.1-201ENST00000621624 286 ntBASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 SNORA43.4-201ENST00000629559 138 ntBASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
NKX2-3Q8TAU0 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
NKX2-3Q8TAU0 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-3Q8TAU0 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-3Q8TAU0 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.24□□□□□ -1.57
NKX2-3Q8TAU0 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-3Q8TAU0 RNA5SP387-201ENST00000364226 106 ntBASIC5.24□□□□□ -1.57
NKX2-3Q8TAU0 SNORD32A-201ENST00000364805 84 ntBASIC5.24□□□□□ -1.57
NKX2-3Q8TAU0 RNU6-728P-201ENST00000365375 104 ntBASIC5.24□□□□□ -1.57
NKX2-3Q8TAU0 Y_RNA.572-201ENST00000384757 98 ntBASIC5.24□□□□□ -1.57
NKX2-3Q8TAU0 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
NKX2-3Q8TAU0 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-3Q8TAU0 MIR921-201ENST00000401133 56 ntBASIC5.24□□□□□ -1.57
NKX2-3Q8TAU0 Y_RNA.630-201ENST00000411370 108 ntBASIC5.24□□□□□ -1.57
NKX2-3Q8TAU0 ELOCP21-201ENST00000412558 336 ntBASIC5.24□□□□□ -1.57
NKX2-3Q8TAU0 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-3Q8TAU0 PTMAP3-201ENST00000447474 330 ntBASIC5.24□□□□□ -1.57
NKX2-3Q8TAU0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC5.24□□□□□ -1.57
NKX2-3Q8TAU0 snoU109.2-201ENST00000459316 135 ntBASIC5.24□□□□□ -1.57
NKX2-3Q8TAU0 RNA5SP103-201ENST00000459503 118 ntBASIC5.24□□□□□ -1.57
NKX2-3Q8TAU0 RN7SL98P-201ENST00000462271 300 ntBASIC5.24□□□□□ -1.57
NKX2-3Q8TAU0 AC006380.1-201ENST00000603598 186 ntBASIC5.24□□□□□ -1.57
NKX2-3Q8TAU0 AC131238.1-201ENST00000617135 328 ntBASIC5.24□□□□□ -1.57
NKX2-3Q8TAU0 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
NKX2-3Q8TAU0 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-3Q8TAU0 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-3Q8TAU0 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
NKX2-3Q8TAU0 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-3Q8TAU0 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
NKX2-3Q8TAU0 AC069528.2-201ENST00000624849 1991 ntBASIC5.24□□□□□ -1.57
NKX2-3Q8TAU0 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-3Q8TAU0 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NKX2-3Q8TAU0 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.23□□□□□ -1.57
NKX2-3Q8TAU0 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
NKX2-3Q8TAU0 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NKX2-3Q8TAU0 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
NKX2-3Q8TAU0 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NKX2-3Q8TAU0 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.23□□□□□ -1.57
NKX2-3Q8TAU0 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NKX2-3Q8TAU0 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
NKX2-3Q8TAU0 U3.9-201ENST00000363823 204 ntBASIC5.23□□□□□ -1.57
NKX2-3Q8TAU0 SNORD46.1-201ENST00000364139 104 ntBASIC5.23□□□□□ -1.57
NKX2-3Q8TAU0 RNU6-597P-201ENST00000365620 102 ntBASIC5.23□□□□□ -1.57
NKX2-3Q8TAU0 MIR487A-201ENST00000385009 80 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 308.1 ms