Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 MIR5188-201ENST00000583467 113 ntBASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 AC100812.1-201ENST00000607622 580 ntBASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 AL137790.1-201ENST00000634283 177 ntBASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 AF127577.6-201ENST00000623352 2191 ntBASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 Y_RNA.33-201ENST00000362591 102 ntBASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 RNU6-379P-201ENST00000363813 104 ntBASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 RNU6-335P-201ENST00000364563 113 ntBASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 RNU6-99P-201ENST00000364721 107 ntBASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 RNA5SP189-201ENST00000364920 115 ntBASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 Y_RNA.307-201ENST00000365022 117 ntBASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 RNA5SP235-201ENST00000365411 114 ntBASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 DEFB109C-201ENST00000382575 264 ntBASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 DEFB109B-201ENST00000382656 264 ntBASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 Y_RNA.396-201ENST00000383949 103 ntBASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 RNU6-472P-201ENST00000384299 107 ntBASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 RNU6-847P-201ENST00000411115 108 ntBASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 AC009310.1-201ENST00000414414 451 ntBASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 RPS15AP6-201ENST00000420703 385 ntBASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 RPS20P22-201ENST00000473700 357 ntBASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 RPL7P47-201ENST00000497299 556 ntBASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 SCARNA15.2-201ENST00000516409 127 ntBASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 SNORA40.14-201ENST00000516543 86 ntBASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 Y_RNA.715-201ENST00000517082 110 ntBASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 AC026333.2-201ENST00000542164 106 ntBASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 SNORD84-203ENST00000584275 78 ntBASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 AL121917.1-203ENST00000605534 577 ntBASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 AC092628.2-201ENST00000622492 339 ntBASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 AL353746.1-201ENST00000566293 6881 ntBASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SLC44A3Q8N4M1 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 Y_RNA.48-201ENST00000362710 103 ntBASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 Y_RNA.210-201ENST00000364161 110 ntBASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 U8.8-201ENST00000365399 135 ntBASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 MIR301A-201ENST00000385261 86 ntBASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 U3.42-201ENST00000408746 214 ntBASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 RNU2-37P-201ENST00000410695 177 ntBASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 RPS15AP10-201ENST00000432472 382 ntBASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 AC092573.2-201ENST00000434546 243 ntBASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 AC107083.1-201ENST00000439643 279 ntBASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 AC073910.1-201ENST00000445047 438 ntBASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 AL031274.1-201ENST00000450334 232 ntBASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 RPS24P6-201ENST00000452670 400 ntBASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 AL158827.2-201ENST00000602494 330 ntBASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 AC006023.1-201ENST00000603944 259 ntBASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 AC016727.2-201ENST00000603988 621 ntBASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 AC062037.2-201ENST00000610137 73 ntBASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 RMST_8.1-201ENST00000610287 165 ntBASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 RNVU1-4-201ENST00000612985 164 ntBASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 AC090132.2-201ENST00000615881 347 ntBASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 MIR8062-201ENST00000621515 85 ntBASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 AC018692.3-201ENST00000623929 123 ntBASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 AL691447.3-201ENST00000635020 330 ntBASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SLC44A3Q8N4M1 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SLC44A3Q8N4M1 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
SLC44A3Q8N4M1 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SLC44A3Q8N4M1 DEFB108F-201ENST00000344638 222 ntBASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 SNORD14B-201ENST00000364533 90 ntBASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 Y_RNA.276-201ENST00000364732 109 ntBASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 Y_RNA.314-201ENST00000365114 102 ntBASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 AL591034.2-201ENST00000402839 359 ntBASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-1156P-201ENST00000410365 100 ntBASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-1025P-201ENST00000410629 104 ntBASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 AL096701.2-201ENST00000416920 238 ntBASIC3.4□□□□□ -1.87
SLC44A3Q8N4M1 NDUFB4P7-201ENST00000423198 363 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms