Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 SNORD19.2-201ENST00000516978 73 ntBASIC2.82□□□□□ -1.96
HOXC8P31273 ADI1P3-201ENST00000549509 470 ntBASIC2.82□□□□□ -1.96
HOXC8P31273 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.82□□□□□ -1.96
HOXC8P31273 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.82□□□□□ -1.96
HOXC8P31273 Y_RNA.804-201ENST00000615262 101 ntBASIC2.82□□□□□ -1.96
HOXC8P31273 AC063943.3-201ENST00000615562 356 ntBASIC2.82□□□□□ -1.96
HOXC8P31273 AC090617.10-201ENST00000624308 134 ntBASIC2.82□□□□□ -1.96
HOXC8P31273 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.82□□□□□ -1.96
HOXC8P31273 MTND4P14-201ENST00000435799 1354 ntBASIC2.82□□□□□ -1.96
HOXC8P31273 ZNF658B-202ENST00000615961 3375 ntBASIC2.82□□□□□ -1.96
HOXC8P31273 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HOXC8P31273 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.82□□□□□ -1.96
HOXC8P31273 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.81□□□□□ -1.96
HOXC8P31273 VTRNA1-1-201ENST00000363120 99 ntBASIC2.81□□□□□ -1.96
HOXC8P31273 Y_RNA.157-201ENST00000363638 102 ntBASIC2.81□□□□□ -1.96
HOXC8P31273 Y_RNA.231-201ENST00000364358 102 ntBASIC2.81□□□□□ -1.96
HOXC8P31273 RNU6-38P-201ENST00000384085 107 ntBASIC2.81□□□□□ -1.96
HOXC8P31273 MIR181B1-201ENST00000385240 110 ntBASIC2.81□□□□□ -1.96
HOXC8P31273 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.81□□□□□ -1.96
HOXC8P31273 AL591704.1-201ENST00000432574 275 ntBASIC2.81□□□□□ -1.96
HOXC8P31273 AL161651.1-201ENST00000440882 223 ntBASIC2.81□□□□□ -1.96
HOXC8P31273 SNRPEP8-201ENST00000442866 260 ntBASIC2.81□□□□□ -1.96
HOXC8P31273 AC233279.1-201ENST00000455300 423 ntBASIC2.81□□□□□ -1.96
HOXC8P31273 PMCHL2-203ENST00000457791 237 ntBASIC2.81□□□□□ -1.96
HOXC8P31273 RNU6-333P-201ENST00000459117 107 ntBASIC2.81□□□□□ -1.96
HOXC8P31273 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.81□□□□□ -1.96
HOXC8P31273 TRBV1-201ENST00000476502 284 ntBASIC2.81□□□□□ -1.96
HOXC8P31273 AIG1P1-201ENST00000503376 148 ntBASIC2.81□□□□□ -1.96
HOXC8P31273 AC008413.1-201ENST00000511864 177 ntBASIC2.81□□□□□ -1.96
HOXC8P31273 RNU6-1315P-201ENST00000517187 99 ntBASIC2.81□□□□□ -1.96
HOXC8P31273 AC023050.3-201ENST00000541142 333 ntBASIC2.81□□□□□ -1.96
HOXC8P31273 AL121821.2-201ENST00000556081 394 ntBASIC2.81□□□□□ -1.96
HOXC8P31273 AC018638.8-201ENST00000588755 281 ntBASIC2.81□□□□□ -1.96
HOXC8P31273 OR1M4P-201ENST00000589199 287 ntBASIC2.81□□□□□ -1.96
HOXC8P31273 AC009994.1-201ENST00000606889 253 ntBASIC2.81□□□□□ -1.96
HOXC8P31273 uc_338.34-201ENST00000617467 174 ntBASIC2.81□□□□□ -1.96
HOXC8P31273 uc_338.11-201ENST00000619132 160 ntBASIC2.81□□□□□ -1.96
HOXC8P31273 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.81□□□□□ -1.96
HOXC8P31273 MTND4P12-201ENST00000498999 1377 ntBASIC2.81□□□□□ -1.96
HOXC8P31273 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HOXC8P31273 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
HOXC8P31273 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
HOXC8P31273 Y_RNA.279-201ENST00000364763 95 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 RNU6-19P-201ENST00000384718 107 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 MIR514A2-201ENST00000385131 88 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 MIR514A3-201ENST00000385132 88 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 MIR147B-201ENST00000390185 80 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HOXC8P31273 AL590004.2-201ENST00000404787 371 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 AL162578.1-201ENST00000406202 378 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.8□□□□□ -1.96
HOXC8P31273 Y_RNA.615-201ENST00000410769 117 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 RNU4-46P-201ENST00000410818 138 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.8□□□□□ -1.96
HOXC8P31273 AL513185.2-201ENST00000425543 193 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 AC007560.1-201ENST00000426912 237 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 SRIP2-201ENST00000428470 166 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 AC092427.1-202ENST00000430569 476 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 ERLEC1P1-201ENST00000433806 578 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 RPS15AP7-201ENST00000439294 405 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 HMGN1P12-201ENST00000499125 195 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 AC091951.2-201ENST00000500762 203 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 MTCO3P9-201ENST00000506989 781 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 LRRC34P2-201ENST00000514850 553 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 RNU5F-8P-201ENST00000515941 111 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 RNU6-685P-201ENST00000517088 95 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.8□□□□□ -1.96
HOXC8P31273 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.8□□□□□ -1.96
HOXC8P31273 AC084851.1-201ENST00000529105 249 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.8□□□□□ -1.96
HOXC8P31273 AC006199.1-201ENST00000548728 219 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 AC078814.3-201ENST00000553036 491 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.8□□□□□ -1.96
HOXC8P31273 AL118558.2-201ENST00000556294 238 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.8□□□□□ -1.96
HOXC8P31273 MIR1273C-201ENST00000578669 77 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 LARP7P1-201ENST00000605576 316 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 RNU6-89P-201ENST00000606519 100 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.8□□□□□ -1.96
HOXC8P31273 AC104260.1-201ENST00000616660 539 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.8□□□□□ -1.96
HOXC8P31273 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 AC016717.2-201ENST00000609089 5141 ntBASIC2.8□□□□□ -1.96
HOXC8P31273 AC103710.2-202ENST00000641454 2853 ntBASIC2.79□□□□□ -1.96
HOXC8P31273 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
HOXC8P31273 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
HOXC8P31273 CBX3P1-201ENST00000325243 554 ntBASIC2.79□□□□□ -1.96
HOXC8P31273 Y_RNA.33-201ENST00000362591 102 ntBASIC2.79□□□□□ -1.96
HOXC8P31273 SNORA32.2-201ENST00000384049 122 ntBASIC2.79□□□□□ -1.96
HOXC8P31273 AL359511.1-201ENST00000402970 211 ntBASIC2.79□□□□□ -1.96
HOXC8P31273 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.79□□□□□ -1.96
HOXC8P31273 USP9YP20-201ENST00000419224 558 ntBASIC2.79□□□□□ -1.96
HOXC8P31273 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.79□□□□□ -1.96
HOXC8P31273 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.79□□□□□ -1.96
HOXC8P31273 AC104058.1-201ENST00000448028 297 ntBASIC2.79□□□□□ -1.96
HOXC8P31273 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.79□□□□□ -1.96
HOXC8P31273 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.79□□□□□ -1.96
HOXC8P31273 HMGN2P26-201ENST00000463169 339 ntBASIC2.79□□□□□ -1.96
HOXC8P31273 CCDC34P1-201ENST00000507441 517 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms