Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AL353748.2-201ENST00000622148 471 ntBASIC5.3□□□□□ -1.56
NKX2-3Q8TAU0 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.3□□□□□ -1.56
NKX2-3Q8TAU0 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.3□□□□□ -1.56
NKX2-3Q8TAU0 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NKX2-3Q8TAU0 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NKX2-3Q8TAU0 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NKX2-3Q8TAU0 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
NKX2-3Q8TAU0 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NKX2-3Q8TAU0 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
NKX2-3Q8TAU0 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NKX2-3Q8TAU0 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
NKX2-3Q8TAU0 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
NKX2-3Q8TAU0 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.29□□□□□ -1.56
NKX2-3Q8TAU0 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.29□□□□□ -1.56
NKX2-3Q8TAU0 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
NKX2-3Q8TAU0 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NKX2-3Q8TAU0 RNY1P11-201ENST00000363759 113 ntBASIC5.29□□□□□ -1.56
NKX2-3Q8TAU0 Y_RNA.584-201ENST00000391090 114 ntBASIC5.29□□□□□ -1.56
NKX2-3Q8TAU0 MIR888-201ENST00000401186 77 ntBASIC5.29□□□□□ -1.56
NKX2-3Q8TAU0 RNA5SP317-201ENST00000410176 116 ntBASIC5.29□□□□□ -1.56
NKX2-3Q8TAU0 RNA5SP311-201ENST00000411290 116 ntBASIC5.29□□□□□ -1.56
NKX2-3Q8TAU0 EIF4A1P3-201ENST00000411521 244 ntBASIC5.29□□□□□ -1.56
NKX2-3Q8TAU0 AL158147.1-201ENST00000443970 75 ntBASIC5.29□□□□□ -1.56
NKX2-3Q8TAU0 RN7SL132P-201ENST00000478131 296 ntBASIC5.29□□□□□ -1.56
NKX2-3Q8TAU0 RNA5SP315-201ENST00000516340 116 ntBASIC5.29□□□□□ -1.56
NKX2-3Q8TAU0 RNA5SP54-201ENST00000516951 92 ntBASIC5.29□□□□□ -1.56
NKX2-3Q8TAU0 RNA5SP312-201ENST00000517068 116 ntBASIC5.29□□□□□ -1.56
NKX2-3Q8TAU0 AL160290.3-201ENST00000604869 165 ntBASIC5.29□□□□□ -1.56
NKX2-3Q8TAU0 MIR3653-201ENST00000625572 110 ntBASIC5.29□□□□□ -1.56
NKX2-3Q8TAU0 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NKX2-3Q8TAU0 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
NKX2-3Q8TAU0 CENPCP1-201ENST00000533085 2578 ntBASIC5.29□□□□□ -1.56
NKX2-3Q8TAU0 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NKX2-3Q8TAU0 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.28□□□□□ -1.56
NKX2-3Q8TAU0 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-3Q8TAU0 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-3Q8TAU0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.28□□□□□ -1.56
NKX2-3Q8TAU0 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC5.28□□□□□ -1.56
NKX2-3Q8TAU0 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
NKX2-3Q8TAU0 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.28□□□□□ -1.56
NKX2-3Q8TAU0 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NKX2-3Q8TAU0 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-3Q8TAU0 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-3Q8TAU0 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NKX2-3Q8TAU0 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.28□□□□□ -1.56
NKX2-3Q8TAU0 RNU6-1249P-201ENST00000363237 111 ntBASIC5.28□□□□□ -1.56
NKX2-3Q8TAU0 Y_RNA.294-201ENST00000364916 102 ntBASIC5.28□□□□□ -1.56
NKX2-3Q8TAU0 Y_RNA.329-201ENST00000365209 107 ntBASIC5.28□□□□□ -1.56
NKX2-3Q8TAU0 RNA5SP366-201ENST00000365454 123 ntBASIC5.28□□□□□ -1.56
NKX2-3Q8TAU0 AL355497.1-201ENST00000406262 551 ntBASIC5.28□□□□□ -1.56
NKX2-3Q8TAU0 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.28□□□□□ -1.56
NKX2-3Q8TAU0 RPL23AP83-201ENST00000434984 473 ntBASIC5.28□□□□□ -1.56
NKX2-3Q8TAU0 PARP4P3-201ENST00000510265 317 ntBASIC5.28□□□□□ -1.56
NKX2-3Q8TAU0 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.28□□□□□ -1.56
NKX2-3Q8TAU0 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC5.28□□□□□ -1.56
NKX2-3Q8TAU0 AL591034.3-201ENST00000605511 685 ntBASIC5.28□□□□□ -1.56
NKX2-3Q8TAU0 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
NKX2-3Q8TAU0 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-3Q8TAU0 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
NKX2-3Q8TAU0 AC126323.6-202ENST00000568092 3511 ntBASIC5.27□□□□□ -1.57
NKX2-3Q8TAU0 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NKX2-3Q8TAU0 RNU1-63P-201ENST00000383902 164 ntBASIC5.27□□□□□ -1.57
NKX2-3Q8TAU0 RNU6-72P-201ENST00000384285 79 ntBASIC5.27□□□□□ -1.57
NKX2-3Q8TAU0 RNU6-880P-201ENST00000384526 107 ntBASIC5.27□□□□□ -1.57
NKX2-3Q8TAU0 Y_RNA.521-201ENST00000384560 114 ntBASIC5.27□□□□□ -1.57
NKX2-3Q8TAU0 MIR526A2-201ENST00000390198 65 ntBASIC5.27□□□□□ -1.57
NKX2-3Q8TAU0 RNU6-1228P-201ENST00000391014 107 ntBASIC5.27□□□□□ -1.57
NKX2-3Q8TAU0 SNORA11.2-201ENST00000408318 127 ntBASIC5.27□□□□□ -1.57
NKX2-3Q8TAU0 AC138623.1-201ENST00000418060 216 ntBASIC5.27□□□□□ -1.57
NKX2-3Q8TAU0 RPL23AP95-201ENST00000426806 265 ntBASIC5.27□□□□□ -1.57
NKX2-3Q8TAU0 AC112220.1-201ENST00000434628 355 ntBASIC5.27□□□□□ -1.57
NKX2-3Q8TAU0 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC5.27□□□□□ -1.57
NKX2-3Q8TAU0 AL078601.1-201ENST00000444542 271 ntBASIC5.27□□□□□ -1.57
NKX2-3Q8TAU0 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NKX2-3Q8TAU0 RN7SL542P-201ENST00000467147 294 ntBASIC5.27□□□□□ -1.57
NKX2-3Q8TAU0 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.27□□□□□ -1.57
NKX2-3Q8TAU0 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC5.27□□□□□ -1.57
NKX2-3Q8TAU0 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.27□□□□□ -1.57
NKX2-3Q8TAU0 AC008739.3-201ENST00000603262 127 ntBASIC5.27□□□□□ -1.57
NKX2-3Q8TAU0 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.27□□□□□ -1.57
NKX2-3Q8TAU0 AC004832.5-201ENST00000608677 401 ntBASIC5.27□□□□□ -1.57
NKX2-3Q8TAU0 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NKX2-3Q8TAU0 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
NKX2-3Q8TAU0 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
NKX2-3Q8TAU0 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.27□□□□□ -1.57
NKX2-3Q8TAU0 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NKX2-3Q8TAU0 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NKX2-3Q8TAU0 AC068700.1-201ENST00000565862 3754 ntBASIC5.27□□□□□ -1.57
NKX2-3Q8TAU0 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
NKX2-3Q8TAU0 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.26□□□□□ -1.57
NKX2-3Q8TAU0 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
NKX2-3Q8TAU0 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
NKX2-3Q8TAU0 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.26□□□□□ -1.57
NKX2-3Q8TAU0 SPRR2C-201ENST00000290702 219 ntBASIC5.26□□□□□ -1.57
NKX2-3Q8TAU0 Y_RNA.24-201ENST00000362508 103 ntBASIC5.26□□□□□ -1.57
NKX2-3Q8TAU0 RNU6-527P-201ENST00000363425 104 ntBASIC5.26□□□□□ -1.57
NKX2-3Q8TAU0 RNU4-10P-201ENST00000364383 140 ntBASIC5.26□□□□□ -1.57
NKX2-3Q8TAU0 Y_RNA.287-201ENST00000364853 94 ntBASIC5.26□□□□□ -1.57
NKX2-3Q8TAU0 Y_RNA.293-201ENST00000364908 93 ntBASIC5.26□□□□□ -1.57
NKX2-3Q8TAU0 RNU6-905P-201ENST00000384434 107 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 159.3 ms