Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SNX18P1Y-201ENST00000616231 511 ntBASIC4.61□□□□□ -1.67
LYSMD3Q7Z3D4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.61□□□□□ -1.67
LYSMD3Q7Z3D4 AC140113.4-201ENST00000622087 222 ntBASIC4.61□□□□□ -1.67
LYSMD3Q7Z3D4 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
LYSMD3Q7Z3D4 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
LYSMD3Q7Z3D4 AC010300.1-201ENST00000600671 5134 ntBASIC4.61□□□□□ -1.67
LYSMD3Q7Z3D4 NEAT1-202ENST00000501122 22743 ntBASIC4.61□□□□□ -1.67
LYSMD3Q7Z3D4 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
LYSMD3Q7Z3D4 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LYSMD3Q7Z3D4 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LYSMD3Q7Z3D4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
LYSMD3Q7Z3D4 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LYSMD3Q7Z3D4 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 OR14L1P-202ENST00000641545 3009 ntBASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 RNU6-801P-201ENST00000364087 105 ntBASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 RNU6-1144P-201ENST00000384247 104 ntBASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 MIR626-201ENST00000385032 94 ntBASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 RNU6-460P-201ENST00000391158 108 ntBASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 RNA5SP397-201ENST00000391323 118 ntBASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 AL512633.1-201ENST00000399931 655 ntBASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 MIR1290-201ENST00000408735 78 ntBASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 RPL21P66-201ENST00000426566 466 ntBASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 AL357134.1-201ENST00000445848 426 ntBASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 AC092991.1-201ENST00000477176 376 ntBASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 RN7SKP179-201ENST00000516126 217 ntBASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 RNA5SP76-201ENST00000516277 87 ntBASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 AC209154.1-201ENST00000582156 337 ntBASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 AC006254.2-201ENST00000603259 279 ntBASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 AC099654.7-201ENST00000635788 2127 ntBASIC4.6□□□□□ -1.67
LYSMD3Q7Z3D4 RNU1-20P-201ENST00000363314 162 ntBASIC4.59□□□□□ -1.67
LYSMD3Q7Z3D4 RNU6-1285P-201ENST00000363480 105 ntBASIC4.59□□□□□ -1.67
LYSMD3Q7Z3D4 SNORD113.2-201ENST00000364166 89 ntBASIC4.59□□□□□ -1.67
LYSMD3Q7Z3D4 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.59□□□□□ -1.67
LYSMD3Q7Z3D4 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LYSMD3Q7Z3D4 MIR544A-201ENST00000384855 91 ntBASIC4.59□□□□□ -1.67
LYSMD3Q7Z3D4 MIR659-201ENST00000384963 97 ntBASIC4.59□□□□□ -1.67
LYSMD3Q7Z3D4 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LYSMD3Q7Z3D4 RN7SKP53-201ENST00000411337 315 ntBASIC4.59□□□□□ -1.67
LYSMD3Q7Z3D4 AC006461.1-201ENST00000412637 326 ntBASIC4.59□□□□□ -1.67
LYSMD3Q7Z3D4 Z74021.1-201ENST00000423610 407 ntBASIC4.59□□□□□ -1.67
LYSMD3Q7Z3D4 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LYSMD3Q7Z3D4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.59□□□□□ -1.67
LYSMD3Q7Z3D4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC4.59□□□□□ -1.67
LYSMD3Q7Z3D4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LYSMD3Q7Z3D4 AC115990.1-201ENST00000526957 301 ntBASIC4.59□□□□□ -1.67
LYSMD3Q7Z3D4 AP001781.1-201ENST00000530977 207 ntBASIC4.59□□□□□ -1.67
LYSMD3Q7Z3D4 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.59□□□□□ -1.67
LYSMD3Q7Z3D4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.59□□□□□ -1.67
LYSMD3Q7Z3D4 AC053481.4-201ENST00000583164 216 ntBASIC4.59□□□□□ -1.67
LYSMD3Q7Z3D4 AC019159.1-201ENST00000605094 187 ntBASIC4.59□□□□□ -1.67
LYSMD3Q7Z3D4 AC013791.1-201ENST00000616619 62 ntBASIC4.59□□□□□ -1.67
LYSMD3Q7Z3D4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.59□□□□□ -1.67
LYSMD3Q7Z3D4 AC004925.1-201ENST00000624256 2706 ntBASIC4.59□□□□□ -1.67
LYSMD3Q7Z3D4 MIR3674-201ENST00000636576 68 ntBASIC4.59□□□□□ -1.67
LYSMD3Q7Z3D4 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.59□□□□□ -1.68
LYSMD3Q7Z3D4 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.59□□□□□ -1.68
LYSMD3Q7Z3D4 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.59□□□□□ -1.68
LYSMD3Q7Z3D4 AC068254.2-201ENST00000623938 3577 ntBASIC4.58□□□□□ -1.68
LYSMD3Q7Z3D4 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
LYSMD3Q7Z3D4 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
LYSMD3Q7Z3D4 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.58□□□□□ -1.68
LYSMD3Q7Z3D4 RNA5SP332-201ENST00000391063 115 ntBASIC4.58□□□□□ -1.68
LYSMD3Q7Z3D4 SNORA26.5-201ENST00000391215 123 ntBASIC4.58□□□□□ -1.68
LYSMD3Q7Z3D4 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
LYSMD3Q7Z3D4 HDGFP1-201ENST00000405943 252 ntBASIC4.58□□□□□ -1.68
LYSMD3Q7Z3D4 AL160275.2-201ENST00000412010 394 ntBASIC4.58□□□□□ -1.68
LYSMD3Q7Z3D4 RPS20P14-201ENST00000412545 360 ntBASIC4.58□□□□□ -1.68
LYSMD3Q7Z3D4 AC074117.2-201ENST00000417130 397 ntBASIC4.58□□□□□ -1.68
LYSMD3Q7Z3D4 RPS12P23-201ENST00000419579 400 ntBASIC4.58□□□□□ -1.68
LYSMD3Q7Z3D4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.58□□□□□ -1.68
LYSMD3Q7Z3D4 AL162591.2-201ENST00000449634 317 ntBASIC4.58□□□□□ -1.68
LYSMD3Q7Z3D4 AC091179.3-201ENST00000474761 144 ntBASIC4.58□□□□□ -1.68
LYSMD3Q7Z3D4 SCARNA8-201ENST00000515924 131 ntBASIC4.58□□□□□ -1.68
LYSMD3Q7Z3D4 RNU6-436P-201ENST00000516171 114 ntBASIC4.58□□□□□ -1.68
LYSMD3Q7Z3D4 RNU6-453P-201ENST00000516819 85 ntBASIC4.58□□□□□ -1.68
LYSMD3Q7Z3D4 AP002826.1-201ENST00000608835 315 ntBASIC4.58□□□□□ -1.68
LYSMD3Q7Z3D4 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.58□□□□□ -1.68
LYSMD3Q7Z3D4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.58□□□□□ -1.68
LYSMD3Q7Z3D4 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LYSMD3Q7Z3D4 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.58□□□□□ -1.68
LYSMD3Q7Z3D4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
LYSMD3Q7Z3D4 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
LYSMD3Q7Z3D4 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LYSMD3Q7Z3D4 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
LYSMD3Q7Z3D4 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms