Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
VARS2Q5ST30 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VARS2Q5ST30 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
VARS2Q5ST30 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
VARS2Q5ST30 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.34□□□□□ -1.55
VARS2Q5ST30 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VARS2Q5ST30 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
VARS2Q5ST30 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
VARS2Q5ST30 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.34□□□□□ -1.55
VARS2Q5ST30 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.34□□□□□ -1.55
VARS2Q5ST30 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
VARS2Q5ST30 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VARS2Q5ST30 RNU4-41P-201ENST00000364426 143 ntBASIC5.34□□□□□ -1.55
VARS2Q5ST30 Y_RNA.366-201ENST00000365540 102 ntBASIC5.34□□□□□ -1.55
VARS2Q5ST30 MIR518C-201ENST00000384822 101 ntBASIC5.34□□□□□ -1.55
VARS2Q5ST30 AC007064.1-201ENST00000412238 351 ntBASIC5.34□□□□□ -1.55
VARS2Q5ST30 HMGN2P27-201ENST00000427352 270 ntBASIC5.34□□□□□ -1.55
VARS2Q5ST30 AL353689.1-201ENST00000438895 199 ntBASIC5.34□□□□□ -1.55
VARS2Q5ST30 RPS29P9-201ENST00000440360 171 ntBASIC5.34□□□□□ -1.55
VARS2Q5ST30 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.34□□□□□ -1.55
VARS2Q5ST30 AC073264.2-201ENST00000448886 166 ntBASIC5.34□□□□□ -1.55
VARS2Q5ST30 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC5.34□□□□□ -1.55
VARS2Q5ST30 RNU6-1256P-201ENST00000516539 103 ntBASIC5.34□□□□□ -1.55
VARS2Q5ST30 RNU6-1183P-201ENST00000517054 60 ntBASIC5.34□□□□□ -1.55
VARS2Q5ST30 MIR4660-201ENST00000583549 74 ntBASIC5.34□□□□□ -1.55
VARS2Q5ST30 MIR7703-201ENST00000620784 77 ntBASIC5.34□□□□□ -1.55
VARS2Q5ST30 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
VARS2Q5ST30 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VARS2Q5ST30 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
VARS2Q5ST30 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VARS2Q5ST30 MFSD8-216ENST00000641147 4009 ntBASIC5.34□□□□□ -1.55
VARS2Q5ST30 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.34□□□□□ -1.55
VARS2Q5ST30 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.34□□□□□ -1.56
VARS2Q5ST30 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.56
VARS2Q5ST30 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.34□□□□□ -1.56
VARS2Q5ST30 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VARS2Q5ST30 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
VARS2Q5ST30 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.33□□□□□ -1.56
VARS2Q5ST30 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VARS2Q5ST30 AC092376.2-201ENST00000622621 4116 ntBASIC5.33□□□□□ -1.56
VARS2Q5ST30 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.33□□□□□ -1.56
VARS2Q5ST30 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.33□□□□□ -1.56
VARS2Q5ST30 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
VARS2Q5ST30 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VARS2Q5ST30 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC5.33□□□□□ -1.56
VARS2Q5ST30 AC103975.1-201ENST00000482506 483 ntBASIC5.33□□□□□ -1.56
VARS2Q5ST30 SCARNA23-201ENST00000516060 130 ntBASIC5.33□□□□□ -1.56
VARS2Q5ST30 CR383656.8-201ENST00000549046 145 ntBASIC5.33□□□□□ -1.56
VARS2Q5ST30 AL365205.2-201ENST00000594586 68 ntBASIC5.33□□□□□ -1.56
VARS2Q5ST30 SNORD11B-201ENST00000607707 90 ntBASIC5.33□□□□□ -1.56
VARS2Q5ST30 MIR6780A-201ENST00000615089 68 ntBASIC5.33□□□□□ -1.56
VARS2Q5ST30 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VARS2Q5ST30 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VARS2Q5ST30 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.32□□□□□ -1.56
VARS2Q5ST30 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.32□□□□□ -1.56
VARS2Q5ST30 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.32□□□□□ -1.56
VARS2Q5ST30 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VARS2Q5ST30 RNU6-1323P-201ENST00000384025 107 ntBASIC5.32□□□□□ -1.56
VARS2Q5ST30 SNORA70.10-201ENST00000384515 134 ntBASIC5.32□□□□□ -1.56
VARS2Q5ST30 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC5.32□□□□□ -1.56
VARS2Q5ST30 CYP4F29P-201ENST00000420685 446 ntBASIC5.32□□□□□ -1.56
VARS2Q5ST30 COX6CP13-201ENST00000428703 226 ntBASIC5.32□□□□□ -1.56
VARS2Q5ST30 RPL23AP1-201ENST00000428990 471 ntBASIC5.32□□□□□ -1.56
VARS2Q5ST30 SNORA31.16-201ENST00000516773 139 ntBASIC5.32□□□□□ -1.56
VARS2Q5ST30 RNA5SP230-201ENST00000517039 122 ntBASIC5.32□□□□□ -1.56
VARS2Q5ST30 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.32□□□□□ -1.56
VARS2Q5ST30 U4atac.1-201ENST00000618345 95 ntBASIC5.32□□□□□ -1.56
VARS2Q5ST30 AC068205.3-201ENST00000636385 468 ntBASIC5.32□□□□□ -1.56
VARS2Q5ST30 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VARS2Q5ST30 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VARS2Q5ST30 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VARS2Q5ST30 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VARS2Q5ST30 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VARS2Q5ST30 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
VARS2Q5ST30 PCAT14-202ENST00000627127 3935 ntBASIC5.32□□□□□ -1.56
VARS2Q5ST30 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
VARS2Q5ST30 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
VARS2Q5ST30 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
VARS2Q5ST30 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.31□□□□□ -1.56
VARS2Q5ST30 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
VARS2Q5ST30 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VARS2Q5ST30 AC083843.2-201ENST00000568248 6253 ntBASIC5.31□□□□□ -1.56
VARS2Q5ST30 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.31□□□□□ -1.56
VARS2Q5ST30 AL139281.1-201ENST00000422120 335 ntBASIC5.31□□□□□ -1.56
VARS2Q5ST30 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.31□□□□□ -1.56
VARS2Q5ST30 GEMIN8P3-201ENST00000445417 720 ntBASIC5.31□□□□□ -1.56
VARS2Q5ST30 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VARS2Q5ST30 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VARS2Q5ST30 RPL10P17-201ENST00000453852 316 ntBASIC5.31□□□□□ -1.56
VARS2Q5ST30 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC5.31□□□□□ -1.56
VARS2Q5ST30 RPL23AP67-201ENST00000465341 474 ntBASIC5.31□□□□□ -1.56
VARS2Q5ST30 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC5.31□□□□□ -1.56
VARS2Q5ST30 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.31□□□□□ -1.56
VARS2Q5ST30 RNU6-344P-201ENST00000516635 111 ntBASIC5.31□□□□□ -1.56
VARS2Q5ST30 RNU6-703P-201ENST00000516946 107 ntBASIC5.31□□□□□ -1.56
VARS2Q5ST30 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC5.31□□□□□ -1.56
VARS2Q5ST30 MIR3667-201ENST00000581025 74 ntBASIC5.31□□□□□ -1.56
VARS2Q5ST30 AC105245.1-201ENST00000581934 244 ntBASIC5.31□□□□□ -1.56
VARS2Q5ST30 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VARS2Q5ST30 SDAD1P1-202ENST00000524156 2051 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms