Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 U3.22-201ENST00000391120 215 ntBASIC4.24□□□□□ -1.73
NID1P14543 AL590383.1-201ENST00000428602 75 ntBASIC4.24□□□□□ -1.73
NID1P14543 SNRPEP9-201ENST00000436794 238 ntBASIC4.24□□□□□ -1.73
NID1P14543 IFNWP4-201ENST00000453148 294 ntBASIC4.24□□□□□ -1.73
NID1P14543 snoU13.1-201ENST00000459157 104 ntBASIC4.24□□□□□ -1.73
NID1P14543 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.24□□□□□ -1.73
NID1P14543 RNA5SP446-201ENST00000515955 82 ntBASIC4.24□□□□□ -1.73
NID1P14543 RNA5SP464-201ENST00000516251 108 ntBASIC4.24□□□□□ -1.73
NID1P14543 RNA5SP76-201ENST00000516277 87 ntBASIC4.24□□□□□ -1.73
NID1P14543 AC109810.1-201ENST00000534066 224 ntBASIC4.24□□□□□ -1.73
NID1P14543 PARP1P2-201ENST00000556806 195 ntBASIC4.24□□□□□ -1.73
NID1P14543 LINC00933-203ENST00000559812 219 ntBASIC4.24□□□□□ -1.73
NID1P14543 AC053481.4-201ENST00000583164 216 ntBASIC4.24□□□□□ -1.73
NID1P14543 AL078604.3-201ENST00000615580 211 ntBASIC4.24□□□□□ -1.73
NID1P14543 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.24□□□□□ -1.73
NID1P14543 U3.53-201ENST00000628922 216 ntBASIC4.24□□□□□ -1.73
NID1P14543 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.24□□□□□ -1.73
NID1P14543 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NID1P14543 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.24□□□□□ -1.73
NID1P14543 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NID1P14543 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NID1P14543 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
NID1P14543 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.24□□□□□ -1.73
NID1P14543 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NID1P14543 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NID1P14543 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NID1P14543 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.23□□□□□ -1.73
NID1P14543 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NID1P14543 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.23□□□□□ -1.73
NID1P14543 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
NID1P14543 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
NID1P14543 ZNF137P-201ENST00000456718 1920 ntBASIC4.23□□□□□ -1.73
NID1P14543 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
NID1P14543 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
NID1P14543 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NID1P14543 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NID1P14543 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NID1P14543 RNU6-942P-201ENST00000363002 107 ntBASIC4.23□□□□□ -1.73
NID1P14543 snoU2_19.4-201ENST00000364329 80 ntBASIC4.23□□□□□ -1.73
NID1P14543 RNU6-755P-201ENST00000364400 103 ntBASIC4.23□□□□□ -1.73
NID1P14543 Y_RNA.329-201ENST00000365209 107 ntBASIC4.23□□□□□ -1.73
NID1P14543 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NID1P14543 SNORA70F-201ENST00000384142 135 ntBASIC4.23□□□□□ -1.73
NID1P14543 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NID1P14543 AL512633.1-201ENST00000399931 655 ntBASIC4.23□□□□□ -1.73
NID1P14543 AC006461.1-201ENST00000412637 326 ntBASIC4.23□□□□□ -1.73
NID1P14543 AC009963.1-201ENST00000417265 157 ntBASIC4.23□□□□□ -1.73
NID1P14543 FTH1P6-201ENST00000430768 320 ntBASIC4.23□□□□□ -1.73
NID1P14543 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.23□□□□□ -1.73
NID1P14543 SCARNA10-201ENST00000459255 330 ntBASIC4.23□□□□□ -1.73
NID1P14543 RPS23P7-201ENST00000466210 444 ntBASIC4.23□□□□□ -1.73
NID1P14543 RPL21P126-201ENST00000470049 478 ntBASIC4.23□□□□□ -1.73
NID1P14543 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.23□□□□□ -1.73
NID1P14543 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.23□□□□□ -1.73
NID1P14543 LARP7P3-201ENST00000579888 337 ntBASIC4.23□□□□□ -1.73
NID1P14543 AP002826.1-201ENST00000608835 315 ntBASIC4.23□□□□□ -1.73
NID1P14543 AC090132.2-201ENST00000615881 347 ntBASIC4.23□□□□□ -1.73
NID1P14543 AC099654.7-201ENST00000635788 2127 ntBASIC4.23□□□□□ -1.73
NID1P14543 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NID1P14543 A2MP1-204ENST00000566278 4130 ntBASIC4.23□□□□□ -1.73
NID1P14543 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.23□□□□□ -1.73
NID1P14543 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NID1P14543 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
NID1P14543 AC004925.1-201ENST00000624256 2706 ntBASIC4.23□□□□□ -1.73
NID1P14543 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
NID1P14543 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.22□□□□□ -1.73
NID1P14543 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NID1P14543 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
NID1P14543 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NID1P14543 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NID1P14543 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
NID1P14543 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NID1P14543 SNORD56.1-201ENST00000362913 68 ntBASIC4.22□□□□□ -1.73
NID1P14543 SNORA70.2-201ENST00000364506 135 ntBASIC4.22□□□□□ -1.73
NID1P14543 SNORA71.2-201ENST00000364941 134 ntBASIC4.22□□□□□ -1.73
NID1P14543 SNORA36A-201ENST00000384221 132 ntBASIC4.22□□□□□ -1.73
NID1P14543 RNU6-1144P-201ENST00000384247 104 ntBASIC4.22□□□□□ -1.73
NID1P14543 SNORA8.3-201ENST00000384679 139 ntBASIC4.22□□□□□ -1.73
NID1P14543 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.22□□□□□ -1.73
NID1P14543 BPY2DP-201ENST00000422208 265 ntBASIC4.22□□□□□ -1.73
NID1P14543 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.22□□□□□ -1.73
NID1P14543 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.22□□□□□ -1.73
NID1P14543 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.22□□□□□ -1.73
NID1P14543 snoU13.6-201ENST00000458785 104 ntBASIC4.22□□□□□ -1.73
NID1P14543 RPL30P12-201ENST00000474666 353 ntBASIC4.22□□□□□ -1.73
NID1P14543 FCF1P8-201ENST00000510322 597 ntBASIC4.22□□□□□ -1.73
NID1P14543 AC006499.6-201ENST00000511169 607 ntBASIC4.22□□□□□ -1.73
NID1P14543 RNU6-1183P-201ENST00000517054 60 ntBASIC4.22□□□□□ -1.73
NID1P14543 RNU4-60P-201ENST00000517239 135 ntBASIC4.22□□□□□ -1.73
NID1P14543 AP004242.1-201ENST00000533701 349 ntBASIC4.22□□□□□ -1.73
NID1P14543 TOMM20P2-201ENST00000540082 421 ntBASIC4.22□□□□□ -1.73
NID1P14543 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NID1P14543 TRAV28-201ENST00000557548 323 ntBASIC4.22□□□□□ -1.73
NID1P14543 MED28P6-201ENST00000558776 231 ntBASIC4.22□□□□□ -1.73
NID1P14543 MIR4284-201ENST00000578924 81 ntBASIC4.22□□□□□ -1.73
NID1P14543 AC006380.1-201ENST00000603598 186 ntBASIC4.22□□□□□ -1.73
NID1P14543 AC019159.1-201ENST00000605094 187 ntBASIC4.22□□□□□ -1.73
NID1P14543 AL354798.1-201ENST00000622505 329 ntBASIC4.22□□□□□ -1.73
NID1P14543 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
NID1P14543 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms