Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 MARK2P15-201ENST00000432204 2186 ntBASIC5.15□□□□□ -1.58
ACTN4O43707 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.15□□□□□ -1.58
ACTN4O43707 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
ACTN4O43707 RNU6-1048P-201ENST00000364054 107 ntBASIC5.15□□□□□ -1.59
ACTN4O43707 Y_RNA.393-201ENST00000383936 102 ntBASIC5.15□□□□□ -1.59
ACTN4O43707 SNORA72.4-201ENST00000384174 132 ntBASIC5.15□□□□□ -1.59
ACTN4O43707 MIR549A-201ENST00000385268 96 ntBASIC5.15□□□□□ -1.59
ACTN4O43707 AL355497.1-201ENST00000406262 551 ntBASIC5.15□□□□□ -1.59
ACTN4O43707 RN7SKP267-201ENST00000410381 285 ntBASIC5.15□□□□□ -1.59
ACTN4O43707 YPEL5P1-201ENST00000419731 367 ntBASIC5.15□□□□□ -1.59
ACTN4O43707 AC244670.1-201ENST00000436879 112 ntBASIC5.15□□□□□ -1.59
ACTN4O43707 AC146507.2-201ENST00000460608 476 ntBASIC5.15□□□□□ -1.59
ACTN4O43707 RPL23AP70-201ENST00000483361 460 ntBASIC5.15□□□□□ -1.59
ACTN4O43707 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.15□□□□□ -1.59
ACTN4O43707 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC5.15□□□□□ -1.59
ACTN4O43707 Y_RNA.757-201ENST00000578934 114 ntBASIC5.15□□□□□ -1.59
ACTN4O43707 MIR4737-201ENST00000583979 81 ntBASIC5.15□□□□□ -1.59
ACTN4O43707 AC091178.1-203ENST00000584586 279 ntBASIC5.15□□□□□ -1.59
ACTN4O43707 TEX41-243ENST00000614173 190 ntTSL 5 BASIC5.15□□□□□ -1.59
ACTN4O43707 MIR7155-201ENST00000615925 56 ntBASIC5.15□□□□□ -1.59
ACTN4O43707 AC039056.2-201ENST00000622261 511 ntBASIC5.15□□□□□ -1.59
ACTN4O43707 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.15□□□□□ -1.59
ACTN4O43707 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
ACTN4O43707 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
ACTN4O43707 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC5.15□□□□□ -1.59
ACTN4O43707 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
ACTN4O43707 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
ACTN4O43707 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
ACTN4O43707 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
ACTN4O43707 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.15□□□□□ -1.59
ACTN4O43707 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ACTN4O43707 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
ACTN4O43707 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
ACTN4O43707 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.14□□□□□ -1.59
ACTN4O43707 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.14□□□□□ -1.59
ACTN4O43707 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.14□□□□□ -1.59
ACTN4O43707 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ACTN4O43707 RNY1P11-201ENST00000363759 113 ntBASIC5.14□□□□□ -1.59
ACTN4O43707 Y_RNA.251-201ENST00000364551 99 ntBASIC5.14□□□□□ -1.59
ACTN4O43707 Y_RNA.294-201ENST00000364916 102 ntBASIC5.14□□□□□ -1.59
ACTN4O43707 RNU6-629P-201ENST00000384061 103 ntBASIC5.14□□□□□ -1.59
ACTN4O43707 MIR526A2-201ENST00000390198 65 ntBASIC5.14□□□□□ -1.59
ACTN4O43707 MIR1302-4-201ENST00000408701 150 ntBASIC5.14□□□□□ -1.59
ACTN4O43707 AC016831.4-201ENST00000438302 307 ntBASIC5.14□□□□□ -1.59
ACTN4O43707 HSPE1P13-201ENST00000451143 297 ntBASIC5.14□□□□□ -1.59
ACTN4O43707 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
ACTN4O43707 RNU6-772P-201ENST00000516042 105 ntBASIC5.14□□□□□ -1.59
ACTN4O43707 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.14□□□□□ -1.59
ACTN4O43707 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.14□□□□□ -1.59
ACTN4O43707 NDUFA5P6-201ENST00000542110 379 ntBASIC5.14□□□□□ -1.59
ACTN4O43707 AL445567.2-201ENST00000618935 498 ntBASIC5.14□□□□□ -1.59
ACTN4O43707 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
ACTN4O43707 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ACTN4O43707 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ACTN4O43707 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ACTN4O43707 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
ACTN4O43707 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
ACTN4O43707 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ACTN4O43707 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ACTN4O43707 AC021146.4-201ENST00000309229 279 ntBASIC5.13□□□□□ -1.59
ACTN4O43707 AL590240.1-201ENST00000334118 313 ntBASIC5.13□□□□□ -1.59
ACTN4O43707 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ACTN4O43707 RNU6-728P-201ENST00000365375 104 ntBASIC5.13□□□□□ -1.59
ACTN4O43707 MIR105-2-201ENST00000385083 81 ntBASIC5.13□□□□□ -1.59
ACTN4O43707 MT-TT-201ENST00000387460 66 ntBASIC5.13□□□□□ -1.59
ACTN4O43707 RNA5SP372-201ENST00000390836 115 ntBASIC5.13□□□□□ -1.59
ACTN4O43707 SNORA75.5-201ENST00000391291 81 ntBASIC5.13□□□□□ -1.59
ACTN4O43707 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.13□□□□□ -1.59
ACTN4O43707 HMGB1P37-201ENST00000439613 609 ntBASIC5.13□□□□□ -1.59
ACTN4O43707 HMGB3P8-201ENST00000449709 577 ntBASIC5.13□□□□□ -1.59
ACTN4O43707 AC007215.1-201ENST00000464893 276 ntBASIC5.13□□□□□ -1.59
ACTN4O43707 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.13□□□□□ -1.59
ACTN4O43707 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.13□□□□□ -1.59
ACTN4O43707 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC5.13□□□□□ -1.59
ACTN4O43707 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.13□□□□□ -1.59
ACTN4O43707 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC5.13□□□□□ -1.59
ACTN4O43707 CR383656.8-201ENST00000549046 145 ntBASIC5.13□□□□□ -1.59
ACTN4O43707 MIR4646-201ENST00000580775 63 ntBASIC5.13□□□□□ -1.59
ACTN4O43707 UBE2Q2P6-201ENST00000612666 153 ntBASIC5.13□□□□□ -1.59
ACTN4O43707 U3.53-201ENST00000628922 216 ntBASIC5.13□□□□□ -1.59
ACTN4O43707 AC107027.3-201ENST00000565095 3473 ntBASIC5.13□□□□□ -1.59
ACTN4O43707 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
ACTN4O43707 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ACTN4O43707 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
ACTN4O43707 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ACTN4O43707 AC092435.4-201ENST00000623012 4159 ntBASIC5.12□□□□□ -1.59
ACTN4O43707 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.12□□□□□ -1.59
ACTN4O43707 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ACTN4O43707 Y_RNA.369-201ENST00000365568 117 ntBASIC5.12□□□□□ -1.59
ACTN4O43707 RNU6-1228P-201ENST00000391014 107 ntBASIC5.12□□□□□ -1.59
ACTN4O43707 AL606845.1-201ENST00000404881 255 ntBASIC5.12□□□□□ -1.59
ACTN4O43707 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC5.12□□□□□ -1.59
ACTN4O43707 FAR2P2-201ENST00000413041 594 ntBASIC5.12□□□□□ -1.59
ACTN4O43707 AL714022.1-201ENST00000439897 151 ntBASIC5.12□□□□□ -1.59
ACTN4O43707 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
ACTN4O43707 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ACTN4O43707 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ACTN4O43707 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.12□□□□□ -1.59
ACTN4O43707 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.12□□□□□ -1.59
ACTN4O43707 IGLV2-34-201ENST00000490007 283 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms