Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AL356057.1-201ENST00000533798 831 ntBASIC1.33□□□□□ -2.2
UPK2O00526 CBX3P4-201ENST00000538909 354 ntBASIC1.33□□□□□ -2.2
UPK2O00526 ADI1P3-201ENST00000549509 470 ntBASIC1.33□□□□□ -2.2
UPK2O00526 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.33□□□□□ -2.2
UPK2O00526 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.33□□□□□ -2.2
UPK2O00526 MIR4285-201ENST00000581001 85 ntBASIC1.33□□□□□ -2.2
UPK2O00526 AL022345.1-201ENST00000607292 135 ntBASIC1.33□□□□□ -2.2
UPK2O00526 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.33□□□□□ -2.2
UPK2O00526 MIR1248-201ENST00000629190 106 ntBASIC1.33□□□□□ -2.2
UPK2O00526 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
UPK2O00526 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.33□□□□□ -2.2
UPK2O00526 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
UPK2O00526 AL391994.1-201ENST00000254724 282 ntBASIC1.32□□□□□ -2.2
UPK2O00526 AC073343.1-201ENST00000328239 651 ntBASIC1.32□□□□□ -2.2
UPK2O00526 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.32□□□□□ -2.2
UPK2O00526 RNU1-58P-201ENST00000362413 163 ntBASIC1.32□□□□□ -2.2
UPK2O00526 RNU4-42P-201ENST00000364738 142 ntBASIC1.32□□□□□ -2.2
UPK2O00526 RNA5SP363-201ENST00000365072 115 ntBASIC1.32□□□□□ -2.2
UPK2O00526 Y_RNA.597-201ENST00000410463 100 ntBASIC1.32□□□□□ -2.2
UPK2O00526 EIF4EP2-201ENST00000422816 654 ntBASIC1.32□□□□□ -2.2
UPK2O00526 AC245102.2-201ENST00000448956 180 ntBASIC1.32□□□□□ -2.2
UPK2O00526 NDUFB1P2-201ENST00000449477 176 ntBASIC1.32□□□□□ -2.2
UPK2O00526 RPL30P6-201ENST00000475925 342 ntBASIC1.32□□□□□ -2.2
UPK2O00526 RPL23AP63-201ENST00000498752 471 ntBASIC1.32□□□□□ -2.2
UPK2O00526 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.32□□□□□ -2.2
UPK2O00526 RBBP4P6-201ENST00000508098 202 ntBASIC1.32□□□□□ -2.2
UPK2O00526 AC117532.1-201ENST00000514638 323 ntBASIC1.32□□□□□ -2.2
UPK2O00526 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.32□□□□□ -2.2
UPK2O00526 RNU5A-4P-201ENST00000516588 111 ntBASIC1.32□□□□□ -2.2
UPK2O00526 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.32□□□□□ -2.2
UPK2O00526 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.32□□□□□ -2.2
UPK2O00526 AC018714.1-201ENST00000605028 208 ntBASIC1.32□□□□□ -2.2
UPK2O00526 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.32□□□□□ -2.2
UPK2O00526 AC068944.2-201ENST00000610373 403 ntBASIC1.32□□□□□ -2.2
UPK2O00526 AC091834.1-201ENST00000614543 472 ntBASIC1.32□□□□□ -2.2
UPK2O00526 AC104010.1-201ENST00000616889 150 ntBASIC1.32□□□□□ -2.2
UPK2O00526 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.32□□□□□ -2.2
UPK2O00526 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
UPK2O00526 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
UPK2O00526 OR4G2P-201ENST00000328113 903 ntBASIC1.31□□□□□ -2.2
UPK2O00526 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.31□□□□□ -2.2
UPK2O00526 RNU6-439P-201ENST00000384188 106 ntBASIC1.31□□□□□ -2.2
UPK2O00526 MIR513B-201ENST00000385136 84 ntBASIC1.31□□□□□ -2.2
UPK2O00526 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
UPK2O00526 POLHP1-201ENST00000411806 470 ntBASIC1.31□□□□□ -2.2
UPK2O00526 MTCO2P8-201ENST00000412213 658 ntBASIC1.31□□□□□ -2.2
UPK2O00526 RPS20P15-201ENST00000412792 311 ntBASIC1.31□□□□□ -2.2
UPK2O00526 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.31□□□□□ -2.2
UPK2O00526 SSR1P2-201ENST00000415208 787 ntBASIC1.31□□□□□ -2.2
UPK2O00526 MTCYBP5-201ENST00000423752 1135 ntBASIC1.31□□□□□ -2.2
UPK2O00526 USP9YP18-201ENST00000425912 695 ntBASIC1.31□□□□□ -2.2
UPK2O00526 CALM2P2-201ENST00000428512 440 ntBASIC1.31□□□□□ -2.2
UPK2O00526 AL365400.1-201ENST00000431854 640 ntBASIC1.31□□□□□ -2.2
UPK2O00526 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.31□□□□□ -2.2
UPK2O00526 IFNA20P-201ENST00000436840 528 ntBASIC1.31□□□□□ -2.2
UPK2O00526 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.31□□□□□ -2.2
UPK2O00526 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.31□□□□□ -2.2
UPK2O00526 AL360271.2-201ENST00000447710 161 ntBASIC1.31□□□□□ -2.2
UPK2O00526 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.31□□□□□ -2.2
UPK2O00526 HMGN2P23-201ENST00000456759 269 ntBASIC1.31□□□□□ -2.2
UPK2O00526 snoU13.14-201ENST00000459372 104 ntBASIC1.31□□□□□ -2.2
UPK2O00526 BZW1P2-201ENST00000473537 826 ntBASIC1.31□□□□□ -2.2
UPK2O00526 UBL5P3-201ENST00000475112 231 ntBASIC1.31□□□□□ -2.2
UPK2O00526 AC010587.1-201ENST00000505809 469 ntBASIC1.31□□□□□ -2.2
UPK2O00526 AC093259.1-201ENST00000509755 300 ntBASIC1.31□□□□□ -2.2
UPK2O00526 RNU1-86P-201ENST00000516108 154 ntBASIC1.31□□□□□ -2.2
UPK2O00526 RNVU1-2-201ENST00000516326 135 ntBASIC1.31□□□□□ -2.2
UPK2O00526 RNU1-107P-201ENST00000516617 154 ntBASIC1.31□□□□□ -2.2
UPK2O00526 RNU6-250P-201ENST00000516958 103 ntBASIC1.31□□□□□ -2.2
UPK2O00526 RN7SKP256-201ENST00000517201 314 ntBASIC1.31□□□□□ -2.2
UPK2O00526 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.31□□□□□ -2.2
UPK2O00526 AC090888.2-201ENST00000559765 1144 ntBASIC1.31□□□□□ -2.2
UPK2O00526 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.31□□□□□ -2.2
UPK2O00526 DEFB122-202ENST00000569013 197 ntBASIC1.31□□□□□ -2.2
UPK2O00526 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.31□□□□□ -2.2
UPK2O00526 MIR4999-201ENST00000585029 91 ntBASIC1.31□□□□□ -2.2
UPK2O00526 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.31□□□□□ -2.2
UPK2O00526 AC016925.2-201ENST00000605108 242 ntBASIC1.31□□□□□ -2.2
UPK2O00526 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.31□□□□□ -2.2
UPK2O00526 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.31□□□□□ -2.2
UPK2O00526 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.31□□□□□ -2.2
UPK2O00526 SCARNA4-202ENST00000625402 129 ntBASIC1.31□□□□□ -2.2
UPK2O00526 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.31□□□□□ -2.2
UPK2O00526 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.31□□□□□ -2.2
UPK2O00526 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
UPK2O00526 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
UPK2O00526 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
UPK2O00526 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
UPK2O00526 RNU4-1-201ENST00000363925 141 ntBASIC1.3□□□□□ -2.2
UPK2O00526 SNORA24.1-201ENST00000384401 135 ntBASIC1.3□□□□□ -2.2
UPK2O00526 RPL17P50-201ENST00000396131 546 ntBASIC1.3□□□□□ -2.2
UPK2O00526 MTCYBP36-201ENST00000404146 440 ntBASIC1.3□□□□□ -2.2
UPK2O00526 RNA5SP390-201ENST00000410191 113 ntBASIC1.3□□□□□ -2.2
UPK2O00526 RN7SKP101-201ENST00000411376 320 ntBASIC1.3□□□□□ -2.2
UPK2O00526 RNA5SP111-201ENST00000411386 101 ntBASIC1.3□□□□□ -2.2
UPK2O00526 SRIP3-201ENST00000413200 219 ntBASIC1.3□□□□□ -2.2
UPK2O00526 AC009310.1-201ENST00000414414 451 ntBASIC1.3□□□□□ -2.2
UPK2O00526 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.3□□□□□ -2.2
UPK2O00526 AC119618.1-201ENST00000434191 222 ntBASIC1.3□□□□□ -2.2
UPK2O00526 AL122001.1-201ENST00000457027 370 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms