Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.45■■□□□ 1.02
PTCH2Q9Y6C5 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTCH2Q9Y6C5 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTCH2Q9Y6C5 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTCH2Q9Y6C5 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
PTCH2Q9Y6C5 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTCH2Q9Y6C5 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.44■■□□□ 1.02
PTCH2Q9Y6C5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTCH2Q9Y6C5 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTCH2Q9Y6C5 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
PTCH2Q9Y6C5 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTCH2Q9Y6C5 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
PTCH2Q9Y6C5 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.44■■□□□ 1.02
PTCH2Q9Y6C5 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.44■■□□□ 1.02
PTCH2Q9Y6C5 AC090616.6-201ENST00000582640 721 ntBASIC21.44■■□□□ 1.02
PTCH2Q9Y6C5 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
PTCH2Q9Y6C5 IGHV3-41-201ENST00000613121 348 ntBASIC21.44■■□□□ 1.02
PTCH2Q9Y6C5 AL773604.1-201ENST00000617417 272 ntBASIC21.44■■□□□ 1.02
PTCH2Q9Y6C5 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.44■■□□□ 1.02
PTCH2Q9Y6C5 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTCH2Q9Y6C5 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PTCH2Q9Y6C5 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.44■■□□□ 1.02
PTCH2Q9Y6C5 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTCH2Q9Y6C5 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.44■■□□□ 1.02
PTCH2Q9Y6C5 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PTCH2Q9Y6C5 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.44■■□□□ 1.02
PTCH2Q9Y6C5 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTCH2Q9Y6C5 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PTCH2Q9Y6C5 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
PTCH2Q9Y6C5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.43■■□□□ 1.02
PTCH2Q9Y6C5 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PTCH2Q9Y6C5 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PTCH2Q9Y6C5 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PTCH2Q9Y6C5 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PTCH2Q9Y6C5 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PTCH2Q9Y6C5 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
PTCH2Q9Y6C5 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.43■■□□□ 1.02
PTCH2Q9Y6C5 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC21.43■■□□□ 1.02
PTCH2Q9Y6C5 MIR3180-5-201ENST00000583743 153 ntBASIC21.43■■□□□ 1.02
PTCH2Q9Y6C5 Z69720.1-201ENST00000601483 472 ntBASIC21.43■■□□□ 1.02
PTCH2Q9Y6C5 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
PTCH2Q9Y6C5 AC112497.1-201ENST00000624824 639 ntBASIC21.43■■□□□ 1.02
PTCH2Q9Y6C5 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.43■■□□□ 1.02
PTCH2Q9Y6C5 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC21.43■■□□□ 1.02
PTCH2Q9Y6C5 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PTCH2Q9Y6C5 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PTCH2Q9Y6C5 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.43■■□□□ 1.02
PTCH2Q9Y6C5 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PTCH2Q9Y6C5 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PTCH2Q9Y6C5 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PTCH2Q9Y6C5 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PTCH2Q9Y6C5 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PTCH2Q9Y6C5 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PTCH2Q9Y6C5 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PTCH2Q9Y6C5 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PTCH2Q9Y6C5 IGHV3-47-201ENST00000425060 335 ntBASIC21.42■■□□□ 1.02
PTCH2Q9Y6C5 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PTCH2Q9Y6C5 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
PTCH2Q9Y6C5 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PTCH2Q9Y6C5 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PTCH2Q9Y6C5 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
PTCH2Q9Y6C5 AC005332.3-201ENST00000589904 676 ntBASIC21.42■■□□□ 1.02
PTCH2Q9Y6C5 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC21.42■■□□□ 1.02
PTCH2Q9Y6C5 HOTTIP_1.1-201ENST00000620415 57 ntBASIC21.42■■□□□ 1.02
PTCH2Q9Y6C5 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
PTCH2Q9Y6C5 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PTCH2Q9Y6C5 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.41■■□□□ 1.02
PTCH2Q9Y6C5 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTCH2Q9Y6C5 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTCH2Q9Y6C5 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.41■■□□□ 1.02
PTCH2Q9Y6C5 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTCH2Q9Y6C5 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.41■■□□□ 1.02
PTCH2Q9Y6C5 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTCH2Q9Y6C5 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTCH2Q9Y6C5 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.41■■□□□ 1.02
PTCH2Q9Y6C5 BX842568.4-201ENST00000421222 227 ntBASIC21.41■■□□□ 1.02
PTCH2Q9Y6C5 HMGN1P19-201ENST00000436976 333 ntBASIC21.41■■□□□ 1.02
PTCH2Q9Y6C5 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.41■■□□□ 1.02
PTCH2Q9Y6C5 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.41■■□□□ 1.02
PTCH2Q9Y6C5 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC21.41■■□□□ 1.02
PTCH2Q9Y6C5 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
PTCH2Q9Y6C5 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC21.41■■□□□ 1.02
PTCH2Q9Y6C5 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PTCH2Q9Y6C5 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTCH2Q9Y6C5 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.41■■□□□ 1.02
PTCH2Q9Y6C5 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PTCH2Q9Y6C5 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PTCH2Q9Y6C5 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PTCH2Q9Y6C5 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PTCH2Q9Y6C5 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.4■■□□□ 1.02
PTCH2Q9Y6C5 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.4■■□□□ 1.02
PTCH2Q9Y6C5 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PTCH2Q9Y6C5 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PTCH2Q9Y6C5 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PTCH2Q9Y6C5 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PTCH2Q9Y6C5 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC21.4■■□□□ 1.02
PTCH2Q9Y6C5 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC21.4■■□□□ 1.02
PTCH2Q9Y6C5 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.4■■□□□ 1.02
PTCH2Q9Y6C5 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.4■■□□□ 1.02
PTCH2Q9Y6C5 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms