Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 ANO7L1-203ENST00000602586 1720 ntBASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 IRX1P1-201ENST00000438849 1838 ntBASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TRAPPC1Q9Y5R8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TRAPPC1Q9Y5R8 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC1Q9Y5R8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAPPC1Q9Y5R8 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC1Q9Y5R8 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC1Q9Y5R8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC1Q9Y5R8 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC1Q9Y5R8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC1Q9Y5R8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC1Q9Y5R8 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
TRAPPC1Q9Y5R8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC1Q9Y5R8 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC1Q9Y5R8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TRAPPC1Q9Y5R8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAPPC1Q9Y5R8 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC1Q9Y5R8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAPPC1Q9Y5R8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC1Q9Y5R8 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TRAPPC1Q9Y5R8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAPPC1Q9Y5R8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC1Q9Y5R8 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.42□□□□□ -0.1
TRAPPC1Q9Y5R8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAPPC1Q9Y5R8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAPPC1Q9Y5R8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.42□□□□□ -0.1
TRAPPC1Q9Y5R8 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAPPC1Q9Y5R8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAPPC1Q9Y5R8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAPPC1Q9Y5R8 KRT16P6-202ENST00000425692 1426 ntBASIC14.41□□□□□ -0.1
TRAPPC1Q9Y5R8 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAPPC1Q9Y5R8 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TRAPPC1Q9Y5R8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TRAPPC1Q9Y5R8 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAPPC1Q9Y5R8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAPPC1Q9Y5R8 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
TRAPPC1Q9Y5R8 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAPPC1Q9Y5R8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAPPC1Q9Y5R8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAPPC1Q9Y5R8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC14.41□□□□□ -0.1
TRAPPC1Q9Y5R8 EEF1DP3-203ENST00000566025 782 ntBASIC14.41□□□□□ -0.1
TRAPPC1Q9Y5R8 AC008175.2-201ENST00000612840 297 ntBASIC14.41□□□□□ -0.1
TRAPPC1Q9Y5R8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRAPPC1Q9Y5R8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAPPC1Q9Y5R8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAPPC1Q9Y5R8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAPPC1Q9Y5R8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAPPC1Q9Y5R8 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRAPPC1Q9Y5R8 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
TRAPPC1Q9Y5R8 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TRAPPC1Q9Y5R8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAPPC1Q9Y5R8 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAPPC1Q9Y5R8 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAPPC1Q9Y5R8 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAPPC1Q9Y5R8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAPPC1Q9Y5R8 AC135776.1-201ENST00000319817 2481 ntBASIC14.4□□□□□ -0.1
TRAPPC1Q9Y5R8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAPPC1Q9Y5R8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAPPC1Q9Y5R8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TRAPPC1Q9Y5R8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAPPC1Q9Y5R8 AL645608.8-201ENST00000606034 2086 ntBASIC14.4□□□□□ -0.1
TRAPPC1Q9Y5R8 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAPPC1Q9Y5R8 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAPPC1Q9Y5R8 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAPPC1Q9Y5R8 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAPPC1Q9Y5R8 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAPPC1Q9Y5R8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAPPC1Q9Y5R8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAPPC1Q9Y5R8 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAPPC1Q9Y5R8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.4□□□□□ -0.1
TRAPPC1Q9Y5R8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAPPC1Q9Y5R8 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAPPC1Q9Y5R8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRAPPC1Q9Y5R8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAPPC1Q9Y5R8 AC010997.5-201ENST00000609182 354 ntBASIC14.4□□□□□ -0.1
TRAPPC1Q9Y5R8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAPPC1Q9Y5R8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAPPC1Q9Y5R8 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRAPPC1Q9Y5R8 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TRAPPC1Q9Y5R8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms