Protein–RNA interactions for Protein: Q9UKV5

AMFR, E3 ubiquitin-protein ligase AMFR, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMFRQ9UKV5 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
AMFRQ9UKV5 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AMFRQ9UKV5 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.07■□□□□ 0.8
AMFRQ9UKV5 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.07■□□□□ 0.8
AMFRQ9UKV5 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.07■□□□□ 0.8
AMFRQ9UKV5 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.07■□□□□ 0.8
AMFRQ9UKV5 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.07■□□□□ 0.8
AMFRQ9UKV5 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.07■□□□□ 0.8
AMFRQ9UKV5 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AMFRQ9UKV5 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
AMFRQ9UKV5 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AMFRQ9UKV5 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
AMFRQ9UKV5 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
AMFRQ9UKV5 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AMFRQ9UKV5 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AMFRQ9UKV5 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
AMFRQ9UKV5 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AMFRQ9UKV5 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.07■□□□□ 0.8
AMFRQ9UKV5 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.06■□□□□ 0.8
AMFRQ9UKV5 BICD1-207ENST00000551848 1962 ntBASIC20.06■□□□□ 0.8
AMFRQ9UKV5 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AMFRQ9UKV5 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AMFRQ9UKV5 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
AMFRQ9UKV5 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
AMFRQ9UKV5 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.06■□□□□ 0.8
AMFRQ9UKV5 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.06■□□□□ 0.8
AMFRQ9UKV5 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AMFRQ9UKV5 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AMFRQ9UKV5 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AMFRQ9UKV5 TSPY21P-201ENST00000433481 731 ntBASIC20.06■□□□□ 0.8
AMFRQ9UKV5 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.06■□□□□ 0.8
AMFRQ9UKV5 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.06■□□□□ 0.8
AMFRQ9UKV5 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.06■□□□□ 0.8
AMFRQ9UKV5 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
AMFRQ9UKV5 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.06■□□□□ 0.8
AMFRQ9UKV5 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.06■□□□□ 0.8
AMFRQ9UKV5 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.06■□□□□ 0.8
AMFRQ9UKV5 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.06■□□□□ 0.8
AMFRQ9UKV5 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.06■□□□□ 0.8
AMFRQ9UKV5 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AMFRQ9UKV5 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.06■□□□□ 0.8
AMFRQ9UKV5 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AMFRQ9UKV5 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
AMFRQ9UKV5 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AMFRQ9UKV5 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.06■□□□□ 0.8
AMFRQ9UKV5 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
AMFRQ9UKV5 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.05■□□□□ 0.8
AMFRQ9UKV5 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.05■□□□□ 0.8
AMFRQ9UKV5 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.05■□□□□ 0.8
AMFRQ9UKV5 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.05■□□□□ 0.8
AMFRQ9UKV5 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
AMFRQ9UKV5 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
AMFRQ9UKV5 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
AMFRQ9UKV5 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.05■□□□□ 0.8
AMFRQ9UKV5 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.05■□□□□ 0.8
AMFRQ9UKV5 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
AMFRQ9UKV5 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
AMFRQ9UKV5 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
AMFRQ9UKV5 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
AMFRQ9UKV5 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.05■□□□□ 0.8
AMFRQ9UKV5 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AMFRQ9UKV5 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.05■□□□□ 0.8
AMFRQ9UKV5 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
AMFRQ9UKV5 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AMFRQ9UKV5 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.05■□□□□ 0.8
AMFRQ9UKV5 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
AMFRQ9UKV5 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.05■□□□□ 0.8
AMFRQ9UKV5 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AMFRQ9UKV5 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
AMFRQ9UKV5 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AMFRQ9UKV5 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
AMFRQ9UKV5 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AMFRQ9UKV5 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.05■□□□□ 0.8
AMFRQ9UKV5 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.04■□□□□ 0.8
AMFRQ9UKV5 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AMFRQ9UKV5 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AMFRQ9UKV5 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AMFRQ9UKV5 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
AMFRQ9UKV5 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
AMFRQ9UKV5 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
AMFRQ9UKV5 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
AMFRQ9UKV5 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.04■□□□□ 0.8
AMFRQ9UKV5 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
AMFRQ9UKV5 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AMFRQ9UKV5 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.04■□□□□ 0.8
AMFRQ9UKV5 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.04■□□□□ 0.8
AMFRQ9UKV5 AC098934.4-201ENST00000564127 592 ntBASIC20.04■□□□□ 0.8
AMFRQ9UKV5 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
AMFRQ9UKV5 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AMFRQ9UKV5 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.04■□□□□ 0.8
AMFRQ9UKV5 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
AMFRQ9UKV5 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
AMFRQ9UKV5 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AMFRQ9UKV5 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AMFRQ9UKV5 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
AMFRQ9UKV5 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AMFRQ9UKV5 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AMFRQ9UKV5 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AMFRQ9UKV5 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.04■□□□□ 0.8
AMFRQ9UKV5 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms