Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBQLN2Q9UHD9 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.03■□□□□ 0.16
UBQLN2Q9UHD9 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBQLN2Q9UHD9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBQLN2Q9UHD9 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBQLN2Q9UHD9 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UBQLN2Q9UHD9 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.03■□□□□ 0.16
UBQLN2Q9UHD9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UBQLN2Q9UHD9 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UBQLN2Q9UHD9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.03■□□□□ 0.16
UBQLN2Q9UHD9 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UBQLN2Q9UHD9 AC123595.1-201ENST00000440769 1046 ntBASIC16.03■□□□□ 0.16
UBQLN2Q9UHD9 KRT18P14-201ENST00000534205 1250 ntBASIC16.03■□□□□ 0.16
UBQLN2Q9UHD9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.03■□□□□ 0.16
UBQLN2Q9UHD9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.03■□□□□ 0.16
UBQLN2Q9UHD9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.03■□□□□ 0.16
UBQLN2Q9UHD9 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.03■□□□□ 0.16
UBQLN2Q9UHD9 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBQLN2Q9UHD9 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBQLN2Q9UHD9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UBQLN2Q9UHD9 FP475955.4-201ENST00000623131 1990 ntBASIC16.03■□□□□ 0.16
UBQLN2Q9UHD9 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UBQLN2Q9UHD9 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.03■□□□□ 0.16
UBQLN2Q9UHD9 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBQLN2Q9UHD9 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBQLN2Q9UHD9 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
UBQLN2Q9UHD9 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UBQLN2Q9UHD9 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
UBQLN2Q9UHD9 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.03■□□□□ 0.16
UBQLN2Q9UHD9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.03■□□□□ 0.16
UBQLN2Q9UHD9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.03■□□□□ 0.16
UBQLN2Q9UHD9 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
UBQLN2Q9UHD9 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
UBQLN2Q9UHD9 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.02■□□□□ 0.16
UBQLN2Q9UHD9 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
UBQLN2Q9UHD9 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBQLN2Q9UHD9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBQLN2Q9UHD9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
UBQLN2Q9UHD9 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
UBQLN2Q9UHD9 AL356309.3-201ENST00000624132 1934 ntBASIC16.02■□□□□ 0.16
UBQLN2Q9UHD9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBQLN2Q9UHD9 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.02■□□□□ 0.16
UBQLN2Q9UHD9 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBQLN2Q9UHD9 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.02■□□□□ 0.16
UBQLN2Q9UHD9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBQLN2Q9UHD9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBQLN2Q9UHD9 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
UBQLN2Q9UHD9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
UBQLN2Q9UHD9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
UBQLN2Q9UHD9 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.02■□□□□ 0.16
UBQLN2Q9UHD9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
UBQLN2Q9UHD9 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.02■□□□□ 0.16
UBQLN2Q9UHD9 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
UBQLN2Q9UHD9 TPRG1LP1-201ENST00000598702 760 ntBASIC16.02■□□□□ 0.16
UBQLN2Q9UHD9 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBQLN2Q9UHD9 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
UBQLN2Q9UHD9 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.15
UBQLN2Q9UHD9 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
UBQLN2Q9UHD9 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBQLN2Q9UHD9 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBQLN2Q9UHD9 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBQLN2Q9UHD9 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
UBQLN2Q9UHD9 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBQLN2Q9UHD9 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBQLN2Q9UHD9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBQLN2Q9UHD9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.02■□□□□ 0.15
UBQLN2Q9UHD9 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBQLN2Q9UHD9 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
UBQLN2Q9UHD9 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
UBQLN2Q9UHD9 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UBQLN2Q9UHD9 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBQLN2Q9UHD9 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.01■□□□□ 0.15
UBQLN2Q9UHD9 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.01■□□□□ 0.15
UBQLN2Q9UHD9 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UBQLN2Q9UHD9 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBQLN2Q9UHD9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
UBQLN2Q9UHD9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBQLN2Q9UHD9 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
UBQLN2Q9UHD9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBQLN2Q9UHD9 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UBQLN2Q9UHD9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.01■□□□□ 0.15
UBQLN2Q9UHD9 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBQLN2Q9UHD9 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBQLN2Q9UHD9 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBQLN2Q9UHD9 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
UBQLN2Q9UHD9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBQLN2Q9UHD9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBQLN2Q9UHD9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBQLN2Q9UHD9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UBQLN2Q9UHD9 AC034268.1-201ENST00000441047 882 ntBASIC16.01■□□□□ 0.15
UBQLN2Q9UHD9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
UBQLN2Q9UHD9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.01■□□□□ 0.15
UBQLN2Q9UHD9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UBQLN2Q9UHD9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.01■□□□□ 0.15
UBQLN2Q9UHD9 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.01■□□□□ 0.15
UBQLN2Q9UHD9 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UBQLN2Q9UHD9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UBQLN2Q9UHD9 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
UBQLN2Q9UHD9 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
UBQLN2Q9UHD9 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms