Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPARGC1AQ9UBK2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.79■□□□□ 0.76
PPARGC1AQ9UBK2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPARGC1AQ9UBK2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPARGC1AQ9UBK2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PPARGC1AQ9UBK2 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.78■□□□□ 0.76
PPARGC1AQ9UBK2 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PPARGC1AQ9UBK2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PPARGC1AQ9UBK2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PPARGC1AQ9UBK2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PPARGC1AQ9UBK2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PPARGC1AQ9UBK2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PPARGC1AQ9UBK2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PPARGC1AQ9UBK2 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.78■□□□□ 0.76
PPARGC1AQ9UBK2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.78■□□□□ 0.76
PPARGC1AQ9UBK2 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.78■□□□□ 0.76
PPARGC1AQ9UBK2 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PPARGC1AQ9UBK2 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PPARGC1AQ9UBK2 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.78■□□□□ 0.76
PPARGC1AQ9UBK2 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.78■□□□□ 0.76
PPARGC1AQ9UBK2 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.78■□□□□ 0.76
PPARGC1AQ9UBK2 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PPARGC1AQ9UBK2 AP000692.2-201ENST00000608391 879 ntBASIC19.78■□□□□ 0.76
PPARGC1AQ9UBK2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PPARGC1AQ9UBK2 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PPARGC1AQ9UBK2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.78■□□□□ 0.76
PPARGC1AQ9UBK2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.78■□□□□ 0.76
PPARGC1AQ9UBK2 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PPARGC1AQ9UBK2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PPARGC1AQ9UBK2 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PPARGC1AQ9UBK2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
PPARGC1AQ9UBK2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.77■□□□□ 0.76
PPARGC1AQ9UBK2 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PPARGC1AQ9UBK2 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.77■□□□□ 0.76
PPARGC1AQ9UBK2 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.77■□□□□ 0.76
PPARGC1AQ9UBK2 TSPY21P-201ENST00000433481 731 ntBASIC19.77■□□□□ 0.76
PPARGC1AQ9UBK2 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.77■□□□□ 0.76
PPARGC1AQ9UBK2 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PPARGC1AQ9UBK2 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
PPARGC1AQ9UBK2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.77■□□□□ 0.76
PPARGC1AQ9UBK2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PPARGC1AQ9UBK2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
PPARGC1AQ9UBK2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PPARGC1AQ9UBK2 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PPARGC1AQ9UBK2 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PPARGC1AQ9UBK2 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PPARGC1AQ9UBK2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PPARGC1AQ9UBK2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PPARGC1AQ9UBK2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.77■□□□□ 0.76
PPARGC1AQ9UBK2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PPARGC1AQ9UBK2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.77■□□□□ 0.75
PPARGC1AQ9UBK2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PPARGC1AQ9UBK2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
PPARGC1AQ9UBK2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PPARGC1AQ9UBK2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
PPARGC1AQ9UBK2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PPARGC1AQ9UBK2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PPARGC1AQ9UBK2 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 UNC93B2-201ENST00000285383 730 ntBASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 FAM207BP-201ENST00000447172 505 ntBASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 AL355075.4-201ENST00000554988 638 ntBASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 AC020763.4-201ENST00000623414 4170 ntBASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.76■□□□□ 0.75
PPARGC1AQ9UBK2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PPARGC1AQ9UBK2 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
PPARGC1AQ9UBK2 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PPARGC1AQ9UBK2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PPARGC1AQ9UBK2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PPARGC1AQ9UBK2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PPARGC1AQ9UBK2 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
PPARGC1AQ9UBK2 RBM17P1-201ENST00000453646 1190 ntBASIC19.75■□□□□ 0.75
PPARGC1AQ9UBK2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.75■□□□□ 0.75
PPARGC1AQ9UBK2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms