Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.96■□□□□ 0.63
TREX1Q9NSU2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.96■□□□□ 0.63
TREX1Q9NSU2 MIR6786-201ENST00000616843 113 ntBASIC18.96■□□□□ 0.63
TREX1Q9NSU2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.96■□□□□ 0.63
TREX1Q9NSU2 AL135905.2-201ENST00000584934 1404 ntBASIC18.96■□□□□ 0.63
TREX1Q9NSU2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.96■□□□□ 0.63
TREX1Q9NSU2 ANO7L1-203ENST00000602586 1720 ntBASIC18.96■□□□□ 0.63
TREX1Q9NSU2 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TREX1Q9NSU2 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TREX1Q9NSU2 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TREX1Q9NSU2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TREX1Q9NSU2 WIZP1-201ENST00000531444 2299 ntBASIC18.95■□□□□ 0.62
TREX1Q9NSU2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TREX1Q9NSU2 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.95■□□□□ 0.62
TREX1Q9NSU2 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
TREX1Q9NSU2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TREX1Q9NSU2 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TREX1Q9NSU2 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.95■□□□□ 0.62
TREX1Q9NSU2 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.95■□□□□ 0.62
TREX1Q9NSU2 KRT8P3-201ENST00000519669 1449 ntBASIC18.95■□□□□ 0.62
TREX1Q9NSU2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TREX1Q9NSU2 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.95■□□□□ 0.62
TREX1Q9NSU2 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TREX1Q9NSU2 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.95■□□□□ 0.62
TREX1Q9NSU2 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.95■□□□□ 0.62
TREX1Q9NSU2 CKBP1-201ENST00000565489 1086 ntBASIC18.95■□□□□ 0.62
TREX1Q9NSU2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.95■□□□□ 0.62
TREX1Q9NSU2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.95■□□□□ 0.62
TREX1Q9NSU2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.95■□□□□ 0.62
TREX1Q9NSU2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TREX1Q9NSU2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
TREX1Q9NSU2 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TREX1Q9NSU2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TREX1Q9NSU2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
TREX1Q9NSU2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TREX1Q9NSU2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.95■□□□□ 0.62
TREX1Q9NSU2 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.95■□□□□ 0.62
TREX1Q9NSU2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TREX1Q9NSU2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.95■□□□□ 0.62
TREX1Q9NSU2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TREX1Q9NSU2 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TREX1Q9NSU2 HEIH-201ENST00000623091 1652 ntBASIC18.95■□□□□ 0.62
TREX1Q9NSU2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TREX1Q9NSU2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TREX1Q9NSU2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TREX1Q9NSU2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TREX1Q9NSU2 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TREX1Q9NSU2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TREX1Q9NSU2 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TREX1Q9NSU2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
TREX1Q9NSU2 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.94■□□□□ 0.62
TREX1Q9NSU2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TREX1Q9NSU2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.94■□□□□ 0.62
TREX1Q9NSU2 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TREX1Q9NSU2 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TREX1Q9NSU2 ABHD17AP1-201ENST00000358206 933 ntBASIC18.94■□□□□ 0.62
TREX1Q9NSU2 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TREX1Q9NSU2 FAM197Y1-201ENST00000421178 764 ntBASIC18.94■□□□□ 0.62
TREX1Q9NSU2 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TREX1Q9NSU2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TREX1Q9NSU2 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.94■□□□□ 0.62
TREX1Q9NSU2 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.94■□□□□ 0.62
TREX1Q9NSU2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TREX1Q9NSU2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TREX1Q9NSU2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TREX1Q9NSU2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TREX1Q9NSU2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.94■□□□□ 0.62
TREX1Q9NSU2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
TREX1Q9NSU2 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TREX1Q9NSU2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TREX1Q9NSU2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TREX1Q9NSU2 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TREX1Q9NSU2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.93■□□□□ 0.62
TREX1Q9NSU2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TREX1Q9NSU2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TREX1Q9NSU2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TREX1Q9NSU2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.93■□□□□ 0.62
TREX1Q9NSU2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.93■□□□□ 0.62
TREX1Q9NSU2 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TREX1Q9NSU2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TREX1Q9NSU2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.93■□□□□ 0.62
TREX1Q9NSU2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.93■□□□□ 0.62
TREX1Q9NSU2 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
TREX1Q9NSU2 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TREX1Q9NSU2 FAM207BP-201ENST00000447172 505 ntBASIC18.93■□□□□ 0.62
TREX1Q9NSU2 UBE2SP1-201ENST00000450587 669 ntBASIC18.93■□□□□ 0.62
TREX1Q9NSU2 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TREX1Q9NSU2 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
TREX1Q9NSU2 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TREX1Q9NSU2 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.93■□□□□ 0.62
TREX1Q9NSU2 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.93■□□□□ 0.62
TREX1Q9NSU2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.93■□□□□ 0.62
TREX1Q9NSU2 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
TREX1Q9NSU2 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.93■□□□□ 0.62
TREX1Q9NSU2 CD177P1-201ENST00000606252 935 ntBASIC18.93■□□□□ 0.62
TREX1Q9NSU2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.93■□□□□ 0.62
TREX1Q9NSU2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.93■□□□□ 0.62
TREX1Q9NSU2 AC068587.9-201ENST00000641814 219 ntBASIC18.93■□□□□ 0.62
TREX1Q9NSU2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TREX1Q9NSU2 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms