Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 FP475955.4-201ENST00000623131 1990 ntBASIC17.68■□□□□ 0.42
CTPS2Q9NRF8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTPS2Q9NRF8 AC007613.1-201ENST00000572811 2597 ntBASIC17.68■□□□□ 0.42
CTPS2Q9NRF8 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTPS2Q9NRF8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTPS2Q9NRF8 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTPS2Q9NRF8 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.68■□□□□ 0.42
CTPS2Q9NRF8 KRASP1-201ENST00000407852 552 ntBASIC17.68■□□□□ 0.42
CTPS2Q9NRF8 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.68■□□□□ 0.42
CTPS2Q9NRF8 TUBB8P6-201ENST00000436895 1288 ntBASIC17.68■□□□□ 0.42
CTPS2Q9NRF8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.68■□□□□ 0.42
CTPS2Q9NRF8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.68■□□□□ 0.42
CTPS2Q9NRF8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.68■□□□□ 0.42
CTPS2Q9NRF8 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.68■□□□□ 0.42
CTPS2Q9NRF8 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTPS2Q9NRF8 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.68■□□□□ 0.42
CTPS2Q9NRF8 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CTPS2Q9NRF8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTPS2Q9NRF8 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTPS2Q9NRF8 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTPS2Q9NRF8 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.68■□□□□ 0.42
CTPS2Q9NRF8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 AC239809.2-201ENST00000415381 517 ntBASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 RN7SL471P-201ENST00000580476 299 ntBASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTPS2Q9NRF8 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 IRX1P1-201ENST00000438849 1838 ntBASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS2Q9NRF8 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms