Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.29■■□□□ 1
PDLIM7Q9NR12 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PDLIM7Q9NR12 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDLIM7Q9NR12 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.29■■□□□ 1
PDLIM7Q9NR12 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
PDLIM7Q9NR12 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.29■■□□□ 1
PDLIM7Q9NR12 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDLIM7Q9NR12 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
PDLIM7Q9NR12 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDLIM7Q9NR12 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.29■■□□□ 1
PDLIM7Q9NR12 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDLIM7Q9NR12 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDLIM7Q9NR12 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
PDLIM7Q9NR12 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.29■■□□□ 1
PDLIM7Q9NR12 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDLIM7Q9NR12 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PDLIM7Q9NR12 AC111152.3-201ENST00000569699 673 ntBASIC21.29■■□□□ 1
PDLIM7Q9NR12 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDLIM7Q9NR12 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.29■■□□□ 1
PDLIM7Q9NR12 CR769767.2-201ENST00000622735 460 ntBASIC21.29■■□□□ 1
PDLIM7Q9NR12 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDLIM7Q9NR12 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.29■■□□□ 1
PDLIM7Q9NR12 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDLIM7Q9NR12 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
PDLIM7Q9NR12 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDLIM7Q9NR12 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
PDLIM7Q9NR12 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PDLIM7Q9NR12 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.29■■□□□ 1
PDLIM7Q9NR12 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PDLIM7Q9NR12 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDLIM7Q9NR12 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PDLIM7Q9NR12 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.28■■□□□ 1
PDLIM7Q9NR12 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDLIM7Q9NR12 AC004870.1-201ENST00000315132 882 ntBASIC21.28■■□□□ 1
PDLIM7Q9NR12 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.28■■□□□ 1
PDLIM7Q9NR12 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDLIM7Q9NR12 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.28■■□□□ 1
PDLIM7Q9NR12 KRT17P6-201ENST00000453795 1220 ntBASIC21.28■■□□□ 1
PDLIM7Q9NR12 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PDLIM7Q9NR12 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDLIM7Q9NR12 KRT8P11-201ENST00000409686 1436 ntBASIC21.28■■□□□ 1
PDLIM7Q9NR12 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.28■■□□□ 1
PDLIM7Q9NR12 KRT8P10-201ENST00000450021 1447 ntBASIC21.28■■□□□ 1
PDLIM7Q9NR12 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.28■■□□□ 1
PDLIM7Q9NR12 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.28■■□□□ 1
PDLIM7Q9NR12 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.28■■□□□ 1
PDLIM7Q9NR12 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.27■■□□□ 1
PDLIM7Q9NR12 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDLIM7Q9NR12 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDLIM7Q9NR12 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDLIM7Q9NR12 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
PDLIM7Q9NR12 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.27■■□□□ 1
PDLIM7Q9NR12 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.27■■□□□ 1
PDLIM7Q9NR12 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.27■■□□□ 1
PDLIM7Q9NR12 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.27■■□□□ 1
PDLIM7Q9NR12 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.27■■□□□ 1
PDLIM7Q9NR12 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.27■■□□□ 1
PDLIM7Q9NR12 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.27■■□□□ 1
PDLIM7Q9NR12 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.27■■□□□ 1
PDLIM7Q9NR12 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.27■■□□□ 1
PDLIM7Q9NR12 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.27■■□□□ 1
PDLIM7Q9NR12 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDLIM7Q9NR12 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
PDLIM7Q9NR12 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.27■□□□□ 0.99
PDLIM7Q9NR12 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PDLIM7Q9NR12 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.27■□□□□ 0.99
PDLIM7Q9NR12 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PDLIM7Q9NR12 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PDLIM7Q9NR12 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDLIM7Q9NR12 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDLIM7Q9NR12 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDLIM7Q9NR12 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.26■□□□□ 0.99
PDLIM7Q9NR12 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDLIM7Q9NR12 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.26■□□□□ 0.99
PDLIM7Q9NR12 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDLIM7Q9NR12 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.26■□□□□ 0.99
PDLIM7Q9NR12 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDLIM7Q9NR12 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.26■□□□□ 0.99
PDLIM7Q9NR12 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.26■□□□□ 0.99
PDLIM7Q9NR12 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.26■□□□□ 0.99
PDLIM7Q9NR12 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.26■□□□□ 0.99
PDLIM7Q9NR12 AC092329.2-201ENST00000598402 547 ntBASIC21.26■□□□□ 0.99
PDLIM7Q9NR12 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDLIM7Q9NR12 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.26■□□□□ 0.99
PDLIM7Q9NR12 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDLIM7Q9NR12 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDLIM7Q9NR12 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDLIM7Q9NR12 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PDLIM7Q9NR12 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.26■□□□□ 0.99
PDLIM7Q9NR12 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDLIM7Q9NR12 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDLIM7Q9NR12 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDLIM7Q9NR12 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDLIM7Q9NR12 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDLIM7Q9NR12 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDLIM7Q9NR12 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDLIM7Q9NR12 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PDLIM7Q9NR12 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.25■□□□□ 0.99
PDLIM7Q9NR12 UNC93B7-201ENST00000509439 705 ntBASIC21.25■□□□□ 0.99
PDLIM7Q9NR12 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms