Protein–RNA interactions for Protein: Q9NQX1

PRDM5, PR domain zinc finger protein 5, humanhuman

Predicted RBP Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5Q9NQX1 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PRDM5Q9NQX1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.88■□□□□ 0.93
PRDM5Q9NQX1 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
PRDM5Q9NQX1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.88■□□□□ 0.93
PRDM5Q9NQX1 AL157888.1-201ENST00000631930 593 ntBASIC20.88■□□□□ 0.93
PRDM5Q9NQX1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRDM5Q9NQX1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRDM5Q9NQX1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRDM5Q9NQX1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.88■□□□□ 0.93
PRDM5Q9NQX1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.88■□□□□ 0.93
PRDM5Q9NQX1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PRDM5Q9NQX1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRDM5Q9NQX1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.88■□□□□ 0.93
PRDM5Q9NQX1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRDM5Q9NQX1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRDM5Q9NQX1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
PRDM5Q9NQX1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRDM5Q9NQX1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.87■□□□□ 0.93
PRDM5Q9NQX1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PRDM5Q9NQX1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRDM5Q9NQX1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRDM5Q9NQX1 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRDM5Q9NQX1 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.87■□□□□ 0.93
PRDM5Q9NQX1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PRDM5Q9NQX1 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRDM5Q9NQX1 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRDM5Q9NQX1 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRDM5Q9NQX1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRDM5Q9NQX1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
PRDM5Q9NQX1 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRDM5Q9NQX1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.87■□□□□ 0.93
PRDM5Q9NQX1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.87■□□□□ 0.93
PRDM5Q9NQX1 AL136038.4-201ENST00000603606 1261 ntBASIC20.87■□□□□ 0.93
PRDM5Q9NQX1 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.87■□□□□ 0.93
PRDM5Q9NQX1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRDM5Q9NQX1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRDM5Q9NQX1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRDM5Q9NQX1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRDM5Q9NQX1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PRDM5Q9NQX1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRDM5Q9NQX1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRDM5Q9NQX1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.87■□□□□ 0.93
PRDM5Q9NQX1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM5Q9NQX1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM5Q9NQX1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM5Q9NQX1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM5Q9NQX1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.86■□□□□ 0.93
PRDM5Q9NQX1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM5Q9NQX1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM5Q9NQX1 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.86■□□□□ 0.93
PRDM5Q9NQX1 AC104819.1-201ENST00000504587 486 ntBASIC20.86■□□□□ 0.93
PRDM5Q9NQX1 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.86■□□□□ 0.93
PRDM5Q9NQX1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM5Q9NQX1 AL121912.1-201ENST00000603683 238 ntBASIC20.86■□□□□ 0.93
PRDM5Q9NQX1 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.86■□□□□ 0.93
PRDM5Q9NQX1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.86■□□□□ 0.93
PRDM5Q9NQX1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
PRDM5Q9NQX1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM5Q9NQX1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM5Q9NQX1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM5Q9NQX1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM5Q9NQX1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM5Q9NQX1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRDM5Q9NQX1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRDM5Q9NQX1 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRDM5Q9NQX1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PRDM5Q9NQX1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PRDM5Q9NQX1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRDM5Q9NQX1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRDM5Q9NQX1 KRT18P13-201ENST00000400056 1290 ntBASIC20.85■□□□□ 0.93
PRDM5Q9NQX1 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
PRDM5Q9NQX1 AL590627.1-203ENST00000421194 1026 ntBASIC20.85■□□□□ 0.93
PRDM5Q9NQX1 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.85■□□□□ 0.93
PRDM5Q9NQX1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.85■□□□□ 0.93
PRDM5Q9NQX1 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.85■□□□□ 0.93
PRDM5Q9NQX1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.85■□□□□ 0.93
PRDM5Q9NQX1 AL671883.3-201ENST00000603274 991 ntBASIC20.85■□□□□ 0.93
PRDM5Q9NQX1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRDM5Q9NQX1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRDM5Q9NQX1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRDM5Q9NQX1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PRDM5Q9NQX1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRDM5Q9NQX1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.85■□□□□ 0.93
PRDM5Q9NQX1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.85■□□□□ 0.93
PRDM5Q9NQX1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRDM5Q9NQX1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRDM5Q9NQX1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PRDM5Q9NQX1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRDM5Q9NQX1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
PRDM5Q9NQX1 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.84■□□□□ 0.93
PRDM5Q9NQX1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
PRDM5Q9NQX1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
PRDM5Q9NQX1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.84■□□□□ 0.93
PRDM5Q9NQX1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.84■□□□□ 0.93
PRDM5Q9NQX1 HLA-F-220ENST00000434407 884 ntBASIC20.84■□□□□ 0.93
PRDM5Q9NQX1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.84■□□□□ 0.93
PRDM5Q9NQX1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.84■□□□□ 0.93
PRDM5Q9NQX1 RNF126P1-202ENST00000569893 925 ntBASIC20.84■□□□□ 0.93
PRDM5Q9NQX1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRDM5Q9NQX1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms