Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.96■□□□□ 0.47
PRDM9Q9NQV7 CKBP1-201ENST00000565489 1086 ntBASIC17.96■□□□□ 0.47
PRDM9Q9NQV7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.96■□□□□ 0.47
PRDM9Q9NQV7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.96■□□□□ 0.47
PRDM9Q9NQV7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.96■□□□□ 0.47
PRDM9Q9NQV7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
PRDM9Q9NQV7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.96■□□□□ 0.47
PRDM9Q9NQV7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRDM9Q9NQV7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRDM9Q9NQV7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRDM9Q9NQV7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRDM9Q9NQV7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PRDM9Q9NQV7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.95■□□□□ 0.46
PRDM9Q9NQV7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRDM9Q9NQV7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PRDM9Q9NQV7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRDM9Q9NQV7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRDM9Q9NQV7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRDM9Q9NQV7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PRDM9Q9NQV7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
PRDM9Q9NQV7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.95■□□□□ 0.46
PRDM9Q9NQV7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRDM9Q9NQV7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.95■□□□□ 0.46
PRDM9Q9NQV7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.95■□□□□ 0.46
PRDM9Q9NQV7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.95■□□□□ 0.46
PRDM9Q9NQV7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.95■□□□□ 0.46
PRDM9Q9NQV7 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC17.95■□□□□ 0.46
PRDM9Q9NQV7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRDM9Q9NQV7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.95■□□□□ 0.46
PRDM9Q9NQV7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.95■□□□□ 0.46
PRDM9Q9NQV7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRDM9Q9NQV7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRDM9Q9NQV7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRDM9Q9NQV7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PRDM9Q9NQV7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PRDM9Q9NQV7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.94■□□□□ 0.46
PRDM9Q9NQV7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.94■□□□□ 0.46
PRDM9Q9NQV7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PRDM9Q9NQV7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.94■□□□□ 0.46
PRDM9Q9NQV7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PRDM9Q9NQV7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRDM9Q9NQV7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.94■□□□□ 0.46
PRDM9Q9NQV7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.94■□□□□ 0.46
PRDM9Q9NQV7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRDM9Q9NQV7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.94■□□□□ 0.46
PRDM9Q9NQV7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRDM9Q9NQV7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRDM9Q9NQV7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.94■□□□□ 0.46
PRDM9Q9NQV7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRDM9Q9NQV7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRDM9Q9NQV7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.94■□□□□ 0.46
PRDM9Q9NQV7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRDM9Q9NQV7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.94■□□□□ 0.46
PRDM9Q9NQV7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.94■□□□□ 0.46
PRDM9Q9NQV7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRDM9Q9NQV7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.94■□□□□ 0.46
PRDM9Q9NQV7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.94■□□□□ 0.46
PRDM9Q9NQV7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.94■□□□□ 0.46
PRDM9Q9NQV7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRDM9Q9NQV7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.94■□□□□ 0.46
PRDM9Q9NQV7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
PRDM9Q9NQV7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PRDM9Q9NQV7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRDM9Q9NQV7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRDM9Q9NQV7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRDM9Q9NQV7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
PRDM9Q9NQV7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PRDM9Q9NQV7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.93■□□□□ 0.46
PRDM9Q9NQV7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.93■□□□□ 0.46
PRDM9Q9NQV7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PRDM9Q9NQV7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRDM9Q9NQV7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.93■□□□□ 0.46
PRDM9Q9NQV7 NAPSB-206ENST00000562112 1266 ntBASIC17.93■□□□□ 0.46
PRDM9Q9NQV7 C2orf69P3-201ENST00000565542 1120 ntBASIC17.93■□□□□ 0.46
PRDM9Q9NQV7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.93■□□□□ 0.46
PRDM9Q9NQV7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.93■□□□□ 0.46
PRDM9Q9NQV7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRDM9Q9NQV7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRDM9Q9NQV7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PRDM9Q9NQV7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRDM9Q9NQV7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRDM9Q9NQV7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PRDM9Q9NQV7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRDM9Q9NQV7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRDM9Q9NQV7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRDM9Q9NQV7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PRDM9Q9NQV7 KRT8P9-201ENST00000558927 1449 ntBASIC17.92■□□□□ 0.46
PRDM9Q9NQV7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PRDM9Q9NQV7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.92■□□□□ 0.46
PRDM9Q9NQV7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRDM9Q9NQV7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRDM9Q9NQV7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRDM9Q9NQV7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRDM9Q9NQV7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PRDM9Q9NQV7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRDM9Q9NQV7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PRDM9Q9NQV7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.92■□□□□ 0.46
PRDM9Q9NQV7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
PRDM9Q9NQV7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRDM9Q9NQV7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms