Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 TERF1P1-201ENST00000311003 1181 ntBASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 TMPOP1-202ENST00000424642 1267 ntBASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 AC007663.1-201ENST00000438948 1240 ntBASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 TSPY23P-201ENST00000440136 739 ntBASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 AL023803.3-201ENST00000615559 522 ntBASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 AC010653.2-201ENST00000623505 997 ntBASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF304Q9HCX3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 Z82202.1-201ENST00000623446 1880 ntBASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 HMGA1P5-201ENST00000412453 271 ntBASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 ATP5G1P1-201ENST00000448724 379 ntBASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 AL353719.1-201ENST00000566847 864 ntBASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 RN7SL850P-201ENST00000579959 291 ntBASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 FAM87A-204ENST00000613235 858 ntBASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 AC092338.2-201ENST00000568827 1415 ntBASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.03■□□□□ 0.48
ZNF304Q9HCX3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF304Q9HCX3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.02■□□□□ 0.48
ZNF304Q9HCX3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF304Q9HCX3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.02■□□□□ 0.48
ZNF304Q9HCX3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.02■□□□□ 0.48
ZNF304Q9HCX3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF304Q9HCX3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF304Q9HCX3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF304Q9HCX3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF304Q9HCX3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF304Q9HCX3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF304Q9HCX3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF304Q9HCX3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.02■□□□□ 0.48
ZNF304Q9HCX3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.02■□□□□ 0.48
ZNF304Q9HCX3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF304Q9HCX3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.02■□□□□ 0.48
ZNF304Q9HCX3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.02■□□□□ 0.48
ZNF304Q9HCX3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.02■□□□□ 0.48
ZNF304Q9HCX3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF304Q9HCX3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
ZNF304Q9HCX3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
ZNF304Q9HCX3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
ZNF304Q9HCX3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ZNF304Q9HCX3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.02■□□□□ 0.47
ZNF304Q9HCX3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.02■□□□□ 0.47
ZNF304Q9HCX3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.02■□□□□ 0.47
ZNF304Q9HCX3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ZNF304Q9HCX3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF304Q9HCX3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms