Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CSNK1G1Q9HCP0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CSNK1G1Q9HCP0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.86■□□□□ 0.77
CSNK1G1Q9HCP0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.86■□□□□ 0.77
CSNK1G1Q9HCP0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CSNK1G1Q9HCP0 AL109659.2-201ENST00000606809 1674 ntBASIC19.86■□□□□ 0.77
CSNK1G1Q9HCP0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.86■□□□□ 0.77
CSNK1G1Q9HCP0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CSNK1G1Q9HCP0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
CSNK1G1Q9HCP0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CSNK1G1Q9HCP0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CSNK1G1Q9HCP0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1G1Q9HCP0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1G1Q9HCP0 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1G1Q9HCP0 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1G1Q9HCP0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1G1Q9HCP0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1G1Q9HCP0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1G1Q9HCP0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.85■□□□□ 0.77
CSNK1G1Q9HCP0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.85■□□□□ 0.77
CSNK1G1Q9HCP0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CSNK1G1Q9HCP0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1G1Q9HCP0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1G1Q9HCP0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CSNK1G1Q9HCP0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1G1Q9HCP0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1G1Q9HCP0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1G1Q9HCP0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1G1Q9HCP0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 MCCD1P1-208ENST00000445732 328 ntBASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 NEK4P2-201ENST00000580004 1012 ntBASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1G1Q9HCP0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CSNK1G1Q9HCP0 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CSNK1G1Q9HCP0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.83■□□□□ 0.77
CSNK1G1Q9HCP0 RCC2P3-201ENST00000418112 1537 ntBASIC19.83■□□□□ 0.77
CSNK1G1Q9HCP0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.83■□□□□ 0.77
CSNK1G1Q9HCP0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.83■□□□□ 0.77
CSNK1G1Q9HCP0 AC117947.1-201ENST00000427448 529 ntBASIC19.83■□□□□ 0.77
CSNK1G1Q9HCP0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.83■□□□□ 0.77
CSNK1G1Q9HCP0 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.83■□□□□ 0.77
CSNK1G1Q9HCP0 COX11P1-201ENST00000489116 835 ntBASIC19.83■□□□□ 0.77
CSNK1G1Q9HCP0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.83■□□□□ 0.77
CSNK1G1Q9HCP0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.83■□□□□ 0.77
CSNK1G1Q9HCP0 MIR3180-5-201ENST00000583743 153 ntBASIC19.83■□□□□ 0.77
CSNK1G1Q9HCP0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
CSNK1G1Q9HCP0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CSNK1G1Q9HCP0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CSNK1G1Q9HCP0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CSNK1G1Q9HCP0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CSNK1G1Q9HCP0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CSNK1G1Q9HCP0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.83■□□□□ 0.76
CSNK1G1Q9HCP0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CSNK1G1Q9HCP0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSNK1G1Q9HCP0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSNK1G1Q9HCP0 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSNK1G1Q9HCP0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.82■□□□□ 0.76
CSNK1G1Q9HCP0 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CSNK1G1Q9HCP0 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CSNK1G1Q9HCP0 AL049812.1-201ENST00000432563 2267 ntBASIC19.82■□□□□ 0.76
CSNK1G1Q9HCP0 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSNK1G1Q9HCP0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSNK1G1Q9HCP0 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSNK1G1Q9HCP0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CSNK1G1Q9HCP0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.82■□□□□ 0.76
CSNK1G1Q9HCP0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CSNK1G1Q9HCP0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CSNK1G1Q9HCP0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CSNK1G1Q9HCP0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSNK1G1Q9HCP0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CSNK1G1Q9HCP0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.82■□□□□ 0.76
CSNK1G1Q9HCP0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms