Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 PKD1P5-201ENST00000532415 10291 ntBASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 FP475955.4-201ENST00000623131 1990 ntBASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 AC023632.3-201ENST00000521633 145 ntBASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SND1-IT1Q9HBX3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SND1-IT1Q9HBX3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SND1-IT1Q9HBX3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SND1-IT1Q9HBX3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC12.71□□□□□ -0.37
SND1-IT1Q9HBX3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SND1-IT1Q9HBX3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC12.71□□□□□ -0.37
SND1-IT1Q9HBX3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SND1-IT1Q9HBX3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC12.71□□□□□ -0.37
SND1-IT1Q9HBX3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms