Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 AC093028.1-201ENST00000622998 982 ntBASIC18.13■□□□□ 0.49
SPTBN4Q9H254 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPTBN4Q9H254 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPTBN4Q9H254 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPTBN4Q9H254 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SPTBN4Q9H254 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPTBN4Q9H254 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SPTBN4Q9H254 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPTBN4Q9H254 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.12■□□□□ 0.49
SPTBN4Q9H254 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.12■□□□□ 0.49
SPTBN4Q9H254 RBM17P3-201ENST00000417687 1192 ntBASIC18.12■□□□□ 0.49
SPTBN4Q9H254 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SPTBN4Q9H254 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.12■□□□□ 0.49
SPTBN4Q9H254 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.12■□□□□ 0.49
SPTBN4Q9H254 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPTBN4Q9H254 AP001269.4-201ENST00000609611 512 ntBASIC18.12■□□□□ 0.49
SPTBN4Q9H254 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPTBN4Q9H254 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SPTBN4Q9H254 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPTBN4Q9H254 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPTBN4Q9H254 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPTBN4Q9H254 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SPTBN4Q9H254 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SPTBN4Q9H254 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPTBN4Q9H254 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.12■□□□□ 0.49
SPTBN4Q9H254 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.12■□□□□ 0.49
SPTBN4Q9H254 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.12■□□□□ 0.49
SPTBN4Q9H254 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPTBN4Q9H254 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.12■□□□□ 0.49
SPTBN4Q9H254 PHGDH-210ENST00000641115 1638 ntBASIC18.12■□□□□ 0.49
SPTBN4Q9H254 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPTBN4Q9H254 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SPTBN4Q9H254 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.11■□□□□ 0.49
SPTBN4Q9H254 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.11■□□□□ 0.49
SPTBN4Q9H254 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.11■□□□□ 0.49
SPTBN4Q9H254 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.11■□□□□ 0.49
SPTBN4Q9H254 AC087641.1-201ENST00000557561 1021 ntBASIC18.11■□□□□ 0.49
SPTBN4Q9H254 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPTBN4Q9H254 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.11■□□□□ 0.49
SPTBN4Q9H254 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.11■□□□□ 0.49
SPTBN4Q9H254 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SPTBN4Q9H254 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPTBN4Q9H254 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.11■□□□□ 0.49
SPTBN4Q9H254 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SPTBN4Q9H254 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SPTBN4Q9H254 GK-202ENST00000378941 458 ntTSL 3 BASIC18.11■□□□□ 0.49
SPTBN4Q9H254 AC015922.1-201ENST00000421102 1152 ntBASIC18.11■□□□□ 0.49
SPTBN4Q9H254 AC092474.2-201ENST00000424288 719 ntBASIC18.11■□□□□ 0.49
SPTBN4Q9H254 ALG1L5P-201ENST00000482043 771 ntBASIC18.11■□□□□ 0.49
SPTBN4Q9H254 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.11■□□□□ 0.49
SPTBN4Q9H254 MIR5100-201ENST00000579544 119 ntBASIC18.11■□□□□ 0.49
SPTBN4Q9H254 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.11■□□□□ 0.49
SPTBN4Q9H254 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.11■□□□□ 0.49
SPTBN4Q9H254 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SPTBN4Q9H254 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
SPTBN4Q9H254 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.1■□□□□ 0.49
SPTBN4Q9H254 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPTBN4Q9H254 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPTBN4Q9H254 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SPTBN4Q9H254 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPTBN4Q9H254 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.1■□□□□ 0.49
SPTBN4Q9H254 SIGLEC30P-201ENST00000455569 941 ntBASIC18.1■□□□□ 0.49
SPTBN4Q9H254 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.1■□□□□ 0.49
SPTBN4Q9H254 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SPTBN4Q9H254 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SPTBN4Q9H254 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.1■□□□□ 0.49
SPTBN4Q9H254 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SPTBN4Q9H254 POM121L3P-201ENST00000419331 1163 ntBASIC18.1■□□□□ 0.49
SPTBN4Q9H254 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.1■□□□□ 0.49
SPTBN4Q9H254 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.1■□□□□ 0.49
SPTBN4Q9H254 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.1■□□□□ 0.49
SPTBN4Q9H254 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SPTBN4Q9H254 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SPTBN4Q9H254 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.1■□□□□ 0.49
SPTBN4Q9H254 Z92544.3-201ENST00000624747 417 ntBASIC18.1■□□□□ 0.49
SPTBN4Q9H254 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.1■□□□□ 0.49
SPTBN4Q9H254 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPTBN4Q9H254 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.09■□□□□ 0.49
SPTBN4Q9H254 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.09■□□□□ 0.49
SPTBN4Q9H254 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.09■□□□□ 0.49
SPTBN4Q9H254 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPTBN4Q9H254 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPTBN4Q9H254 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPTBN4Q9H254 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.09■□□□□ 0.49
SPTBN4Q9H254 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPTBN4Q9H254 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.09■□□□□ 0.49
SPTBN4Q9H254 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
SPTBN4Q9H254 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPTBN4Q9H254 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SPTBN4Q9H254 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPTBN4Q9H254 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SPTBN4Q9H254 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
SPTBN4Q9H254 AC096582.2-201ENST00000510860 516 ntBASIC18.09■□□□□ 0.49
SPTBN4Q9H254 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SPTBN4Q9H254 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.09■□□□□ 0.49
SPTBN4Q9H254 AC027612.4-201ENST00000605371 583 ntBASIC18.09■□□□□ 0.49
SPTBN4Q9H254 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SPTBN4Q9H254 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.09■□□□□ 0.49
SPTBN4Q9H254 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SPTBN4Q9H254 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms