Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.92■□□□□ 0.94
UBE2OQ9C0C9 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBE2OQ9C0C9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBE2OQ9C0C9 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBE2OQ9C0C9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.92■□□□□ 0.94
UBE2OQ9C0C9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.92■□□□□ 0.94
UBE2OQ9C0C9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBE2OQ9C0C9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
UBE2OQ9C0C9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
UBE2OQ9C0C9 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBE2OQ9C0C9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBE2OQ9C0C9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBE2OQ9C0C9 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
UBE2OQ9C0C9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
UBE2OQ9C0C9 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBE2OQ9C0C9 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.91■□□□□ 0.94
UBE2OQ9C0C9 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.91■□□□□ 0.94
UBE2OQ9C0C9 DRAXINP1-201ENST00000437611 948 ntBASIC20.91■□□□□ 0.94
UBE2OQ9C0C9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.91■□□□□ 0.94
UBE2OQ9C0C9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.91■□□□□ 0.94
UBE2OQ9C0C9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.91■□□□□ 0.94
UBE2OQ9C0C9 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.91■□□□□ 0.94
UBE2OQ9C0C9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.91■□□□□ 0.94
UBE2OQ9C0C9 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.91■□□□□ 0.94
UBE2OQ9C0C9 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.91■□□□□ 0.94
UBE2OQ9C0C9 AL162741.1-201ENST00000565563 1558 ntBASIC20.91■□□□□ 0.94
UBE2OQ9C0C9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
UBE2OQ9C0C9 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBE2OQ9C0C9 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
UBE2OQ9C0C9 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBE2OQ9C0C9 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBE2OQ9C0C9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.9■□□□□ 0.94
UBE2OQ9C0C9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBE2OQ9C0C9 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
UBE2OQ9C0C9 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBE2OQ9C0C9 AC093525.10-201ENST00000625130 1569 ntBASIC20.9■□□□□ 0.94
UBE2OQ9C0C9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBE2OQ9C0C9 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.9■□□□□ 0.94
UBE2OQ9C0C9 TSPY12P-201ENST00000421279 868 ntBASIC20.9■□□□□ 0.94
UBE2OQ9C0C9 KRT16P4-201ENST00000453883 522 ntBASIC20.9■□□□□ 0.94
UBE2OQ9C0C9 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.9■□□□□ 0.94
UBE2OQ9C0C9 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBE2OQ9C0C9 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.9■□□□□ 0.94
UBE2OQ9C0C9 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.9■□□□□ 0.94
UBE2OQ9C0C9 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.9■□□□□ 0.94
UBE2OQ9C0C9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBE2OQ9C0C9 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBE2OQ9C0C9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBE2OQ9C0C9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBE2OQ9C0C9 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
UBE2OQ9C0C9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBE2OQ9C0C9 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
UBE2OQ9C0C9 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.89■□□□□ 0.94
UBE2OQ9C0C9 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.89■□□□□ 0.94
UBE2OQ9C0C9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.89■□□□□ 0.94
UBE2OQ9C0C9 KRT8P41-201ENST00000533985 1514 ntBASIC20.89■□□□□ 0.94
UBE2OQ9C0C9 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
UBE2OQ9C0C9 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
UBE2OQ9C0C9 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.89■□□□□ 0.93
UBE2OQ9C0C9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBE2OQ9C0C9 LINC01465-201ENST00000408887 1940 ntBASIC20.89■□□□□ 0.93
UBE2OQ9C0C9 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
UBE2OQ9C0C9 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.89■□□□□ 0.93
UBE2OQ9C0C9 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.89■□□□□ 0.93
UBE2OQ9C0C9 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
UBE2OQ9C0C9 TSPY22P-201ENST00000427496 604 ntBASIC20.89■□□□□ 0.93
UBE2OQ9C0C9 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.89■□□□□ 0.93
UBE2OQ9C0C9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.89■□□□□ 0.93
UBE2OQ9C0C9 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.89■□□□□ 0.93
UBE2OQ9C0C9 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.89■□□□□ 0.93
UBE2OQ9C0C9 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.89■□□□□ 0.93
UBE2OQ9C0C9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
UBE2OQ9C0C9 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBE2OQ9C0C9 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBE2OQ9C0C9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
UBE2OQ9C0C9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBE2OQ9C0C9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
UBE2OQ9C0C9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBE2OQ9C0C9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBE2OQ9C0C9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBE2OQ9C0C9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBE2OQ9C0C9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBE2OQ9C0C9 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBE2OQ9C0C9 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBE2OQ9C0C9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.88■□□□□ 0.93
UBE2OQ9C0C9 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBE2OQ9C0C9 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBE2OQ9C0C9 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBE2OQ9C0C9 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBE2OQ9C0C9 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBE2OQ9C0C9 TOB2P1-201ENST00000469761 992 ntBASIC20.88■□□□□ 0.93
UBE2OQ9C0C9 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.88■□□□□ 0.93
UBE2OQ9C0C9 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
UBE2OQ9C0C9 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBE2OQ9C0C9 AC007952.6-201ENST00000573168 2673 ntBASIC20.88■□□□□ 0.93
UBE2OQ9C0C9 AC003957.1-201ENST00000625108 2673 ntBASIC20.88■□□□□ 0.93
UBE2OQ9C0C9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBE2OQ9C0C9 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
UBE2OQ9C0C9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBE2OQ9C0C9 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms