Protein–RNA interactions for Protein: Q9BRN9

TM2D3, TM2 domain-containing protein 3, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3Q9BRN9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM2D3Q9BRN9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM2D3Q9BRN9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM2D3Q9BRN9 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TM2D3Q9BRN9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM2D3Q9BRN9 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM2D3Q9BRN9 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM2D3Q9BRN9 AC004870.1-201ENST00000315132 882 ntBASIC13.68□□□□□ -0.22
TM2D3Q9BRN9 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.68□□□□□ -0.22
TM2D3Q9BRN9 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.68□□□□□ -0.22
TM2D3Q9BRN9 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TM2D3Q9BRN9 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.68□□□□□ -0.22
TM2D3Q9BRN9 KRT8P26-201ENST00000534154 1276 ntBASIC13.68□□□□□ -0.22
TM2D3Q9BRN9 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM2D3Q9BRN9 MIR3180-1-201ENST00000580374 94 ntBASIC13.68□□□□□ -0.22
TM2D3Q9BRN9 MIR3180-3-201ENST00000584616 94 ntBASIC13.68□□□□□ -0.22
TM2D3Q9BRN9 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC13.68□□□□□ -0.22
TM2D3Q9BRN9 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC13.68□□□□□ -0.22
TM2D3Q9BRN9 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.68□□□□□ -0.22
TM2D3Q9BRN9 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM2D3Q9BRN9 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.68□□□□□ -0.22
TM2D3Q9BRN9 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM2D3Q9BRN9 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
TM2D3Q9BRN9 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.68□□□□□ -0.22
TM2D3Q9BRN9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM2D3Q9BRN9 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC13.68□□□□□ -0.22
TM2D3Q9BRN9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TM2D3Q9BRN9 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC13.68□□□□□ -0.22
TM2D3Q9BRN9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TM2D3Q9BRN9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM2D3Q9BRN9 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TM2D3Q9BRN9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC13.67□□□□□ -0.22
TM2D3Q9BRN9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TM2D3Q9BRN9 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TM2D3Q9BRN9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC13.67□□□□□ -0.22
TM2D3Q9BRN9 AC093525.10-201ENST00000625130 1569 ntBASIC13.67□□□□□ -0.22
TM2D3Q9BRN9 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TM2D3Q9BRN9 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TM2D3Q9BRN9 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TM2D3Q9BRN9 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TM2D3Q9BRN9 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
TM2D3Q9BRN9 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TM2D3Q9BRN9 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
TM2D3Q9BRN9 FAAHP1-202ENST00000446499 1238 ntBASIC13.67□□□□□ -0.22
TM2D3Q9BRN9 SEC1P-202ENST00000473944 940 ntBASIC13.67□□□□□ -0.22
TM2D3Q9BRN9 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TM2D3Q9BRN9 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.67□□□□□ -0.22
TM2D3Q9BRN9 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC13.67□□□□□ -0.22
TM2D3Q9BRN9 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.67□□□□□ -0.22
TM2D3Q9BRN9 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TM2D3Q9BRN9 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.67□□□□□ -0.22
TM2D3Q9BRN9 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC13.67□□□□□ -0.22
TM2D3Q9BRN9 AL391422.3-201ENST00000603791 2761 ntBASIC13.67□□□□□ -0.22
TM2D3Q9BRN9 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC13.67□□□□□ -0.22
TM2D3Q9BRN9 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TM2D3Q9BRN9 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC13.67□□□□□ -0.22
TM2D3Q9BRN9 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TM2D3Q9BRN9 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TM2D3Q9BRN9 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TM2D3Q9BRN9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TM2D3Q9BRN9 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC13.67□□□□□ -0.22
TM2D3Q9BRN9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TM2D3Q9BRN9 AL162741.1-201ENST00000565563 1558 ntBASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 GABARAPL3-202ENST00000624044 1851 ntBASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 AC246785.2-201ENST00000432512 513 ntBASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 HLA-F-220ENST00000434407 884 ntBASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 AP002383.4-201ENST00000442518 975 ntBASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 NUS1P1-201ENST00000446295 882 ntBASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 SPEG-225ENST00000617028 815 ntTSL 5 BASIC13.66□□□□□ -0.22
TM2D3Q9BRN9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms