Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC6Q99741 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.34■□□□□ 0.53
CDC6Q99741 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.34■□□□□ 0.53
CDC6Q99741 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CDC6Q99741 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC6Q99741 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC6Q99741 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.34■□□□□ 0.53
CDC6Q99741 AC073130.3-201ENST00000624389 2278 ntBASIC18.34■□□□□ 0.53
CDC6Q99741 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC6Q99741 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC6Q99741 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC6Q99741 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.34■□□□□ 0.53
CDC6Q99741 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC6Q99741 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CDC6Q99741 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.33■□□□□ 0.53
CDC6Q99741 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.33■□□□□ 0.53
CDC6Q99741 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDC6Q99741 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDC6Q99741 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.33■□□□□ 0.53
CDC6Q99741 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.33■□□□□ 0.53
CDC6Q99741 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDC6Q99741 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CDC6Q99741 TSPY19P-201ENST00000418461 509 ntBASIC18.33■□□□□ 0.52
CDC6Q99741 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.33■□□□□ 0.52
CDC6Q99741 AP000347.1-202ENST00000435868 847 ntBASIC18.33■□□□□ 0.52
CDC6Q99741 TSPY18P-201ENST00000441642 509 ntBASIC18.33■□□□□ 0.52
CDC6Q99741 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CDC6Q99741 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDC6Q99741 AC091304.2-201ENST00000564639 760 ntBASIC18.33■□□□□ 0.52
CDC6Q99741 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDC6Q99741 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.33■□□□□ 0.52
CDC6Q99741 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CDC6Q99741 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CDC6Q99741 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CDC6Q99741 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.33■□□□□ 0.52
CDC6Q99741 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDC6Q99741 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDC6Q99741 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.33■□□□□ 0.52
CDC6Q99741 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDC6Q99741 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDC6Q99741 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDC6Q99741 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.32■□□□□ 0.52
CDC6Q99741 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC6Q99741 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDC6Q99741 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.32■□□□□ 0.52
CDC6Q99741 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDC6Q99741 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
CDC6Q99741 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDC6Q99741 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC6Q99741 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC6Q99741 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDC6Q99741 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.32■□□□□ 0.52
CDC6Q99741 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC6Q99741 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.32■□□□□ 0.52
CDC6Q99741 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC6Q99741 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CDC6Q99741 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC6Q99741 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC6Q99741 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC6Q99741 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC6Q99741 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDC6Q99741 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC6Q99741 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.31■□□□□ 0.52
CDC6Q99741 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC6Q99741 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CDC6Q99741 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC6Q99741 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC6Q99741 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDC6Q99741 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC6Q99741 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.31■□□□□ 0.52
CDC6Q99741 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDC6Q99741 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CDC6Q99741 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC6Q99741 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
CDC6Q99741 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.31■□□□□ 0.52
CDC6Q99741 TSPY22P-201ENST00000427496 604 ntBASIC18.31■□□□□ 0.52
CDC6Q99741 HLA-F-220ENST00000434407 884 ntBASIC18.31■□□□□ 0.52
CDC6Q99741 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.31■□□□□ 0.52
CDC6Q99741 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.31■□□□□ 0.52
CDC6Q99741 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.31■□□□□ 0.52
CDC6Q99741 AL160237.2-201ENST00000556165 472 ntBASIC18.31■□□□□ 0.52
CDC6Q99741 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.31■□□□□ 0.52
CDC6Q99741 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.31■□□□□ 0.52
CDC6Q99741 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CDC6Q99741 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDC6Q99741 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC6Q99741 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CDC6Q99741 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDC6Q99741 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
CDC6Q99741 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC6Q99741 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDC6Q99741 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CDC6Q99741 GPAT2P1-201ENST00000444924 1672 ntBASIC18.31■□□□□ 0.52
CDC6Q99741 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC6Q99741 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC6Q99741 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
CDC6Q99741 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CDC6Q99741 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CDC6Q99741 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC6Q99741 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms