Protein–RNA interactions for Protein: Q99728

BARD1, BRCA1-associated RING domain protein 1, humanhuman

Known RBP Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1Q99728 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BARD1Q99728 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BARD1Q99728 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BARD1Q99728 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BARD1Q99728 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BARD1Q99728 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
BARD1Q99728 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BARD1Q99728 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BARD1Q99728 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BARD1Q99728 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BARD1Q99728 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.17■□□□□ 0.5
BARD1Q99728 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.17■□□□□ 0.5
BARD1Q99728 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BARD1Q99728 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
BARD1Q99728 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
BARD1Q99728 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
BARD1Q99728 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
BARD1Q99728 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BARD1Q99728 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
BARD1Q99728 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BARD1Q99728 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BARD1Q99728 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BARD1Q99728 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BARD1Q99728 FAM197Y1-201ENST00000421178 764 ntBASIC18.17■□□□□ 0.5
BARD1Q99728 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.17■□□□□ 0.5
BARD1Q99728 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.17■□□□□ 0.5
BARD1Q99728 NUDT16P1-203ENST00000513809 620 ntBASIC18.17■□□□□ 0.5
BARD1Q99728 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.17■□□□□ 0.5
BARD1Q99728 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.17■□□□□ 0.5
BARD1Q99728 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.17■□□□□ 0.5
BARD1Q99728 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.17■□□□□ 0.5
BARD1Q99728 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.17■□□□□ 0.5
BARD1Q99728 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BARD1Q99728 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
BARD1Q99728 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BARD1Q99728 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BARD1Q99728 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.17■□□□□ 0.5
BARD1Q99728 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BARD1Q99728 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.17■□□□□ 0.5
BARD1Q99728 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BARD1Q99728 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.16■□□□□ 0.5
BARD1Q99728 AC005082.1-201ENST00000413042 2259 ntBASIC18.16■□□□□ 0.5
BARD1Q99728 AL049812.1-201ENST00000432563 2267 ntBASIC18.16■□□□□ 0.5
BARD1Q99728 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.16■□□□□ 0.5
BARD1Q99728 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
BARD1Q99728 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
BARD1Q99728 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
BARD1Q99728 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
BARD1Q99728 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.16■□□□□ 0.5
BARD1Q99728 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BARD1Q99728 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
BARD1Q99728 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.16■□□□□ 0.5
BARD1Q99728 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BARD1Q99728 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BARD1Q99728 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BARD1Q99728 RBM17P1-201ENST00000453646 1190 ntBASIC18.16■□□□□ 0.5
BARD1Q99728 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.16■□□□□ 0.5
BARD1Q99728 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.16■□□□□ 0.5
BARD1Q99728 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BARD1Q99728 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.16■□□□□ 0.5
BARD1Q99728 AL590326.2-201ENST00000625139 305 ntBASIC18.16■□□□□ 0.5
BARD1Q99728 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.16■□□□□ 0.5
BARD1Q99728 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BARD1Q99728 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BARD1Q99728 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BARD1Q99728 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.16■□□□□ 0.5
BARD1Q99728 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BARD1Q99728 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.16■□□□□ 0.5
BARD1Q99728 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
BARD1Q99728 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BARD1Q99728 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BARD1Q99728 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BARD1Q99728 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BARD1Q99728 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.15■□□□□ 0.5
BARD1Q99728 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BARD1Q99728 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
BARD1Q99728 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BARD1Q99728 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BARD1Q99728 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.15■□□□□ 0.5
BARD1Q99728 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.15■□□□□ 0.5
BARD1Q99728 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.15■□□□□ 0.5
BARD1Q99728 AP001271.2-201ENST00000624018 1556 ntBASIC18.15■□□□□ 0.5
BARD1Q99728 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
BARD1Q99728 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
BARD1Q99728 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BARD1Q99728 KRT16P6-202ENST00000425692 1426 ntBASIC18.15■□□□□ 0.5
BARD1Q99728 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
BARD1Q99728 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
BARD1Q99728 AC079598.2-202ENST00000546624 1451 ntBASIC18.14■□□□□ 0.5
BARD1Q99728 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.14■□□□□ 0.5
BARD1Q99728 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
BARD1Q99728 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BARD1Q99728 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BARD1Q99728 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BARD1Q99728 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BARD1Q99728 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BARD1Q99728 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BARD1Q99728 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BARD1Q99728 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
BARD1Q99728 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms