Protein–RNA interactions for Protein: Q99643

SDHC, Succinate dehydrogenase cytochrome b560 subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCQ99643 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SDHCQ99643 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SDHCQ99643 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.4■□□□□ 0.22
SDHCQ99643 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SDHCQ99643 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SDHCQ99643 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SDHCQ99643 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SDHCQ99643 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SDHCQ99643 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SDHCQ99643 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SDHCQ99643 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SDHCQ99643 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.4■□□□□ 0.22
SDHCQ99643 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.4■□□□□ 0.22
SDHCQ99643 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.4■□□□□ 0.22
SDHCQ99643 AP001160.3-201ENST00000601484 763 ntBASIC16.4■□□□□ 0.22
SDHCQ99643 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.4■□□□□ 0.22
SDHCQ99643 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SDHCQ99643 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SDHCQ99643 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SDHCQ99643 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SDHCQ99643 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.4■□□□□ 0.22
SDHCQ99643 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
SDHCQ99643 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SDHCQ99643 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.4■□□□□ 0.22
SDHCQ99643 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.4■□□□□ 0.22
SDHCQ99643 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SDHCQ99643 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.4■□□□□ 0.22
SDHCQ99643 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SDHCQ99643 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SDHCQ99643 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
SDHCQ99643 AC093677.2-201ENST00000600169 1863 ntBASIC16.39■□□□□ 0.22
SDHCQ99643 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
SDHCQ99643 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SDHCQ99643 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.39■□□□□ 0.22
SDHCQ99643 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SDHCQ99643 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SDHCQ99643 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SDHCQ99643 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SDHCQ99643 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
SDHCQ99643 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SDHCQ99643 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SDHCQ99643 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.39■□□□□ 0.21
SDHCQ99643 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SDHCQ99643 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SDHCQ99643 CICP6-201ENST00000457191 2729 ntBASIC16.39■□□□□ 0.21
SDHCQ99643 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.39■□□□□ 0.21
SDHCQ99643 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SDHCQ99643 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SDHCQ99643 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
SDHCQ99643 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SDHCQ99643 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.39■□□□□ 0.21
SDHCQ99643 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SDHCQ99643 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC16.39■□□□□ 0.21
SDHCQ99643 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.39■□□□□ 0.21
SDHCQ99643 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.39■□□□□ 0.21
SDHCQ99643 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.39■□□□□ 0.21
SDHCQ99643 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.39■□□□□ 0.21
SDHCQ99643 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SDHCQ99643 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.39■□□□□ 0.21
SDHCQ99643 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.39■□□□□ 0.21
SDHCQ99643 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SDHCQ99643 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SDHCQ99643 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SDHCQ99643 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SDHCQ99643 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SDHCQ99643 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SDHCQ99643 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SDHCQ99643 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SDHCQ99643 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SDHCQ99643 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SDHCQ99643 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.38■□□□□ 0.21
SDHCQ99643 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
SDHCQ99643 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SDHCQ99643 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SDHCQ99643 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SDHCQ99643 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SDHCQ99643 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SDHCQ99643 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SDHCQ99643 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SDHCQ99643 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.38■□□□□ 0.21
SDHCQ99643 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SDHCQ99643 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SDHCQ99643 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SDHCQ99643 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SDHCQ99643 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.38■□□□□ 0.21
SDHCQ99643 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
SDHCQ99643 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SDHCQ99643 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SDHCQ99643 KRT18P20-201ENST00000548986 1279 ntBASIC16.38■□□□□ 0.21
SDHCQ99643 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.38■□□□□ 0.21
SDHCQ99643 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.38■□□□□ 0.21
SDHCQ99643 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
SDHCQ99643 AL391005.1-201ENST00000623953 2435 ntBASIC16.38■□□□□ 0.21
SDHCQ99643 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SDHCQ99643 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.38■□□□□ 0.21
SDHCQ99643 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SDHCQ99643 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SDHCQ99643 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SDHCQ99643 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SDHCQ99643 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms