Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDK5RAP1Q96SZ6 AFG3L1P-217ENST00000557444 2447 ntBASIC19.72■□□□□ 0.75
CDK5RAP1Q96SZ6 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDK5RAP1Q96SZ6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDK5RAP1Q96SZ6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.72■□□□□ 0.75
CDK5RAP1Q96SZ6 MIR1224-201ENST00000408193 85 ntBASIC19.72■□□□□ 0.75
CDK5RAP1Q96SZ6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
CDK5RAP1Q96SZ6 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
CDK5RAP1Q96SZ6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.72■□□□□ 0.75
CDK5RAP1Q96SZ6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.72■□□□□ 0.75
CDK5RAP1Q96SZ6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.72■□□□□ 0.75
CDK5RAP1Q96SZ6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.72■□□□□ 0.75
CDK5RAP1Q96SZ6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.72■□□□□ 0.75
CDK5RAP1Q96SZ6 AC141257.4-201ENST00000634557 245 ntBASIC19.72■□□□□ 0.75
CDK5RAP1Q96SZ6 AC136944.6-201ENST00000634818 245 ntBASIC19.72■□□□□ 0.75
CDK5RAP1Q96SZ6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.72■□□□□ 0.75
CDK5RAP1Q96SZ6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.72■□□□□ 0.75
CDK5RAP1Q96SZ6 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.72■□□□□ 0.75
CDK5RAP1Q96SZ6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
CDK5RAP1Q96SZ6 FP475955.4-201ENST00000623131 1990 ntBASIC19.72■□□□□ 0.75
CDK5RAP1Q96SZ6 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 AL049597.2-201ENST00000565575 961 ntBASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.71■□□□□ 0.75
CDK5RAP1Q96SZ6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDK5RAP1Q96SZ6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CDK5RAP1Q96SZ6 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.7■□□□□ 0.74
CDK5RAP1Q96SZ6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDK5RAP1Q96SZ6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CDK5RAP1Q96SZ6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDK5RAP1Q96SZ6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.7■□□□□ 0.74
CDK5RAP1Q96SZ6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDK5RAP1Q96SZ6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDK5RAP1Q96SZ6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.7■□□□□ 0.74
CDK5RAP1Q96SZ6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.7■□□□□ 0.74
CDK5RAP1Q96SZ6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.7■□□□□ 0.74
CDK5RAP1Q96SZ6 COX11P1-201ENST00000489116 835 ntBASIC19.7■□□□□ 0.74
CDK5RAP1Q96SZ6 NEK4P2-201ENST00000580004 1012 ntBASIC19.7■□□□□ 0.74
CDK5RAP1Q96SZ6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.7■□□□□ 0.74
CDK5RAP1Q96SZ6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDK5RAP1Q96SZ6 AL590326.2-201ENST00000625139 305 ntBASIC19.7■□□□□ 0.74
CDK5RAP1Q96SZ6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CDK5RAP1Q96SZ6 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
CDK5RAP1Q96SZ6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDK5RAP1Q96SZ6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.7■□□□□ 0.74
CDK5RAP1Q96SZ6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDK5RAP1Q96SZ6 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDK5RAP1Q96SZ6 IRX1P1-201ENST00000438849 1838 ntBASIC19.69■□□□□ 0.74
CDK5RAP1Q96SZ6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CDK5RAP1Q96SZ6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP1Q96SZ6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP1Q96SZ6 AC093484.2-201ENST00000580996 2166 ntBASIC19.69■□□□□ 0.74
CDK5RAP1Q96SZ6 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP1Q96SZ6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP1Q96SZ6 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
CDK5RAP1Q96SZ6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.69■□□□□ 0.74
CDK5RAP1Q96SZ6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CDK5RAP1Q96SZ6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP1Q96SZ6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP1Q96SZ6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.69■□□□□ 0.74
CDK5RAP1Q96SZ6 AC010331.1-201ENST00000611423 582 ntBASIC19.69■□□□□ 0.74
CDK5RAP1Q96SZ6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.69■□□□□ 0.74
CDK5RAP1Q96SZ6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP1Q96SZ6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.69■□□□□ 0.74
CDK5RAP1Q96SZ6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
CDK5RAP1Q96SZ6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP1Q96SZ6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CDK5RAP1Q96SZ6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP1Q96SZ6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP1Q96SZ6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP1Q96SZ6 AL032819.2-201ENST00000624543 2162 ntBASIC19.68■□□□□ 0.74
CDK5RAP1Q96SZ6 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms