Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CSMD1Q96PZ7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSMD1Q96PZ7 SMG8-203ENST00000578922 2178 ntBASIC16.18■□□□□ 0.18
CSMD1Q96PZ7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.18■□□□□ 0.18
CSMD1Q96PZ7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CSMD1Q96PZ7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 AC010327.4-202ENST00000591484 748 ntBASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSMD1Q96PZ7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CSMD1Q96PZ7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.16■□□□□ 0.18
CSMD1Q96PZ7 RNF126P1-202ENST00000569893 925 ntBASIC16.16■□□□□ 0.18
CSMD1Q96PZ7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CSMD1Q96PZ7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CSMD1Q96PZ7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSMD1Q96PZ7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.16■□□□□ 0.18
CSMD1Q96PZ7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSMD1Q96PZ7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSMD1Q96PZ7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CSMD1Q96PZ7 AC104819.1-201ENST00000504587 486 ntBASIC16.16■□□□□ 0.18
CSMD1Q96PZ7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.16■□□□□ 0.18
CSMD1Q96PZ7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.16■□□□□ 0.18
CSMD1Q96PZ7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CSMD1Q96PZ7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CSMD1Q96PZ7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSMD1Q96PZ7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CSMD1Q96PZ7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.16■□□□□ 0.18
CSMD1Q96PZ7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CSMD1Q96PZ7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSMD1Q96PZ7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.16■□□□□ 0.18
CSMD1Q96PZ7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSMD1Q96PZ7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.16■□□□□ 0.18
CSMD1Q96PZ7 AP001005.1-201ENST00000571755 1248 ntBASIC16.16■□□□□ 0.18
CSMD1Q96PZ7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.16■□□□□ 0.18
CSMD1Q96PZ7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.16■□□□□ 0.18
CSMD1Q96PZ7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.15■□□□□ 0.18
CSMD1Q96PZ7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CSMD1Q96PZ7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CSMD1Q96PZ7 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.15■□□□□ 0.18
CSMD1Q96PZ7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.15■□□□□ 0.18
CSMD1Q96PZ7 MIR7706-201ENST00000613747 67 ntBASIC16.15■□□□□ 0.18
CSMD1Q96PZ7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSMD1Q96PZ7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSMD1Q96PZ7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.15■□□□□ 0.18
CSMD1Q96PZ7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.15■□□□□ 0.18
CSMD1Q96PZ7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CSMD1Q96PZ7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.15■□□□□ 0.18
CSMD1Q96PZ7 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.15■□□□□ 0.18
CSMD1Q96PZ7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.15■□□□□ 0.18
CSMD1Q96PZ7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CSMD1Q96PZ7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CSMD1Q96PZ7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CSMD1Q96PZ7 DPP3P2-201ENST00000416030 1696 ntBASIC16.15■□□□□ 0.18
CSMD1Q96PZ7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.15■□□□□ 0.18
CSMD1Q96PZ7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSMD1Q96PZ7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.15■□□□□ 0.18
CSMD1Q96PZ7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.15■□□□□ 0.18
CSMD1Q96PZ7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CSMD1Q96PZ7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.15■□□□□ 0.18
CSMD1Q96PZ7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.15■□□□□ 0.18
CSMD1Q96PZ7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CSMD1Q96PZ7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CSMD1Q96PZ7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.14■□□□□ 0.17
CSMD1Q96PZ7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CSMD1Q96PZ7 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.14■□□□□ 0.17
CSMD1Q96PZ7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.14■□□□□ 0.17
CSMD1Q96PZ7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.14■□□□□ 0.17
CSMD1Q96PZ7 AC009065.1-201ENST00000564055 1225 ntBASIC16.14■□□□□ 0.17
CSMD1Q96PZ7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CSMD1Q96PZ7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms