Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPTSSAQ969W0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPTSSAQ969W0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.65■□□□□ 0.26
SPTSSAQ969W0 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPTSSAQ969W0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPTSSAQ969W0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.65■□□□□ 0.26
SPTSSAQ969W0 NIFKP9-201ENST00000419265 221 ntBASIC16.65■□□□□ 0.26
SPTSSAQ969W0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.65■□□□□ 0.26
SPTSSAQ969W0 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.65■□□□□ 0.26
SPTSSAQ969W0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.65■□□□□ 0.26
SPTSSAQ969W0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.65■□□□□ 0.26
SPTSSAQ969W0 MIR4651-201ENST00000582622 73 ntBASIC16.65■□□□□ 0.26
SPTSSAQ969W0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.65■□□□□ 0.26
SPTSSAQ969W0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.65■□□□□ 0.26
SPTSSAQ969W0 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.65■□□□□ 0.26
SPTSSAQ969W0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SPTSSAQ969W0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SPTSSAQ969W0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
SPTSSAQ969W0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPTSSAQ969W0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SPTSSAQ969W0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPTSSAQ969W0 AC093503.3-201ENST00000624917 2352 ntBASIC16.65■□□□□ 0.26
SPTSSAQ969W0 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPTSSAQ969W0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.65■□□□□ 0.26
SPTSSAQ969W0 HTR7P1-201ENST00000538670 1336 ntBASIC16.65■□□□□ 0.26
SPTSSAQ969W0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPTSSAQ969W0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPTSSAQ969W0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
SPTSSAQ969W0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPTSSAQ969W0 AC006333.2-201ENST00000607957 2099 ntBASIC16.65■□□□□ 0.26
SPTSSAQ969W0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPTSSAQ969W0 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.65■□□□□ 0.26
SPTSSAQ969W0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
SPTSSAQ969W0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.64■□□□□ 0.25
SPTSSAQ969W0 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPTSSAQ969W0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.64■□□□□ 0.25
SPTSSAQ969W0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPTSSAQ969W0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.64■□□□□ 0.25
SPTSSAQ969W0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.64■□□□□ 0.25
SPTSSAQ969W0 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPTSSAQ969W0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPTSSAQ969W0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.64■□□□□ 0.25
SPTSSAQ969W0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SPTSSAQ969W0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.64■□□□□ 0.25
SPTSSAQ969W0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SPTSSAQ969W0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.64■□□□□ 0.25
SPTSSAQ969W0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPTSSAQ969W0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SPTSSAQ969W0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SPTSSAQ969W0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPTSSAQ969W0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPTSSAQ969W0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.64■□□□□ 0.25
SPTSSAQ969W0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SPTSSAQ969W0 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPTSSAQ969W0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.64■□□□□ 0.25
SPTSSAQ969W0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SPTSSAQ969W0 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPTSSAQ969W0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPTSSAQ969W0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.63■□□□□ 0.25
SPTSSAQ969W0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SPTSSAQ969W0 AL020996.1-203ENST00000536896 2307 ntBASIC16.63■□□□□ 0.25
SPTSSAQ969W0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.63■□□□□ 0.25
SPTSSAQ969W0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SPTSSAQ969W0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.63■□□□□ 0.25
SPTSSAQ969W0 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.63■□□□□ 0.25
SPTSSAQ969W0 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SPTSSAQ969W0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SPTSSAQ969W0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SPTSSAQ969W0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.63■□□□□ 0.25
SPTSSAQ969W0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SPTSSAQ969W0 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SPTSSAQ969W0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SPTSSAQ969W0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.63■□□□□ 0.25
SPTSSAQ969W0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SPTSSAQ969W0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.63■□□□□ 0.25
SPTSSAQ969W0 RPPH1-201ENST00000516869 333 ntBASIC16.63■□□□□ 0.25
SPTSSAQ969W0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SPTSSAQ969W0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.63■□□□□ 0.25
SPTSSAQ969W0 AL353708.3-201ENST00000610272 989 ntBASIC16.63■□□□□ 0.25
SPTSSAQ969W0 FAM197Y4-202ENST00000622692 608 ntBASIC16.63■□□□□ 0.25
SPTSSAQ969W0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SPTSSAQ969W0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SPTSSAQ969W0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SPTSSAQ969W0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.63■□□□□ 0.25
SPTSSAQ969W0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.63■□□□□ 0.25
SPTSSAQ969W0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.63■□□□□ 0.25
SPTSSAQ969W0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SPTSSAQ969W0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SPTSSAQ969W0 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SPTSSAQ969W0 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SPTSSAQ969W0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
SPTSSAQ969W0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SPTSSAQ969W0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SPTSSAQ969W0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.62■□□□□ 0.25
SPTSSAQ969W0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SPTSSAQ969W0 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.62■□□□□ 0.25
SPTSSAQ969W0 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.62■□□□□ 0.25
SPTSSAQ969W0 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.62■□□□□ 0.25
SPTSSAQ969W0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SPTSSAQ969W0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms