Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTP4A1Q93096 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PTP4A1Q93096 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTP4A1Q93096 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTP4A1Q93096 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTP4A1Q93096 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.07■□□□□ 0.32
PTP4A1Q93096 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTP4A1Q93096 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTP4A1Q93096 ANO7L1-203ENST00000602586 1720 ntBASIC17.07■□□□□ 0.32
PTP4A1Q93096 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
PTP4A1Q93096 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTP4A1Q93096 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTP4A1Q93096 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
PTP4A1Q93096 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PTP4A1Q93096 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTP4A1Q93096 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTP4A1Q93096 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTP4A1Q93096 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTP4A1Q93096 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PTP4A1Q93096 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTP4A1Q93096 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTP4A1Q93096 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.06■□□□□ 0.32
PTP4A1Q93096 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
PTP4A1Q93096 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
PTP4A1Q93096 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.06■□□□□ 0.32
PTP4A1Q93096 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.06■□□□□ 0.32
PTP4A1Q93096 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.06■□□□□ 0.32
PTP4A1Q93096 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PTP4A1Q93096 AC083906.6-201ENST00000641366 219 ntBASIC17.06■□□□□ 0.32
PTP4A1Q93096 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTP4A1Q93096 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PTP4A1Q93096 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTP4A1Q93096 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTP4A1Q93096 AC018470.1-201ENST00000624790 3129 ntBASIC17.06■□□□□ 0.32
PTP4A1Q93096 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTP4A1Q93096 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.06■□□□□ 0.32
PTP4A1Q93096 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.06■□□□□ 0.32
PTP4A1Q93096 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTP4A1Q93096 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTP4A1Q93096 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PTP4A1Q93096 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PTP4A1Q93096 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTP4A1Q93096 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTP4A1Q93096 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PTP4A1Q93096 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTP4A1Q93096 AC005332.8-201ENST00000622750 2735 ntBASIC17.05■□□□□ 0.32
PTP4A1Q93096 AL354751.1-201ENST00000412768 1863 ntBASIC17.05■□□□□ 0.32
PTP4A1Q93096 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTP4A1Q93096 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTP4A1Q93096 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.05■□□□□ 0.32
PTP4A1Q93096 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTP4A1Q93096 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTP4A1Q93096 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTP4A1Q93096 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTP4A1Q93096 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PTP4A1Q93096 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.05■□□□□ 0.32
PTP4A1Q93096 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTP4A1Q93096 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTP4A1Q93096 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTP4A1Q93096 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.05■□□□□ 0.32
PTP4A1Q93096 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PTP4A1Q93096 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTP4A1Q93096 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.05■□□□□ 0.32
PTP4A1Q93096 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTP4A1Q93096 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTP4A1Q93096 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PTP4A1Q93096 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTP4A1Q93096 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTP4A1Q93096 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTP4A1Q93096 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTP4A1Q93096 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTP4A1Q93096 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.05■□□□□ 0.32
PTP4A1Q93096 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.05■□□□□ 0.32
PTP4A1Q93096 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.05■□□□□ 0.32
PTP4A1Q93096 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTP4A1Q93096 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.05■□□□□ 0.32
PTP4A1Q93096 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PTP4A1Q93096 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.05■□□□□ 0.32
PTP4A1Q93096 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTP4A1Q93096 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTP4A1Q93096 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTP4A1Q93096 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTP4A1Q93096 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTP4A1Q93096 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTP4A1Q93096 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTP4A1Q93096 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.05■□□□□ 0.32
PTP4A1Q93096 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTP4A1Q93096 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTP4A1Q93096 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTP4A1Q93096 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.04■□□□□ 0.32
PTP4A1Q93096 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.04■□□□□ 0.32
PTP4A1Q93096 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.04■□□□□ 0.32
PTP4A1Q93096 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTP4A1Q93096 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTP4A1Q93096 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTP4A1Q93096 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTP4A1Q93096 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.04■□□□□ 0.32
PTP4A1Q93096 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTP4A1Q93096 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
PTP4A1Q93096 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms