Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.71■□□□□ 0.75
ATG4AQ8WYN0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.71■□□□□ 0.75
ATG4AQ8WYN0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATG4AQ8WYN0 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ATG4AQ8WYN0 TSPY23P-201ENST00000440136 739 ntBASIC19.71■□□□□ 0.75
ATG4AQ8WYN0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.71■□□□□ 0.75
ATG4AQ8WYN0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.71■□□□□ 0.75
ATG4AQ8WYN0 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.71■□□□□ 0.75
ATG4AQ8WYN0 C1QL1P1-201ENST00000568105 661 ntBASIC19.71■□□□□ 0.75
ATG4AQ8WYN0 AC233263.1-201ENST00000578059 224 ntBASIC19.71■□□□□ 0.75
ATG4AQ8WYN0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.71■□□□□ 0.75
ATG4AQ8WYN0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.71■□□□□ 0.75
ATG4AQ8WYN0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATG4AQ8WYN0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATG4AQ8WYN0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATG4AQ8WYN0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ATG4AQ8WYN0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATG4AQ8WYN0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.74
ATG4AQ8WYN0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ATG4AQ8WYN0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATG4AQ8WYN0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATG4AQ8WYN0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
ATG4AQ8WYN0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATG4AQ8WYN0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.7■□□□□ 0.74
ATG4AQ8WYN0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATG4AQ8WYN0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATG4AQ8WYN0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ATG4AQ8WYN0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATG4AQ8WYN0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.7■□□□□ 0.74
ATG4AQ8WYN0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATG4AQ8WYN0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATG4AQ8WYN0 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATG4AQ8WYN0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.7■□□□□ 0.74
ATG4AQ8WYN0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.7■□□□□ 0.74
ATG4AQ8WYN0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATG4AQ8WYN0 PRKY-204ENST00000533551 1019 ntBASIC19.7■□□□□ 0.74
ATG4AQ8WYN0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.7■□□□□ 0.74
ATG4AQ8WYN0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATG4AQ8WYN0 AC083906.6-201ENST00000641366 219 ntBASIC19.7■□□□□ 0.74
ATG4AQ8WYN0 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.7■□□□□ 0.74
ATG4AQ8WYN0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.7■□□□□ 0.74
ATG4AQ8WYN0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.7■□□□□ 0.74
ATG4AQ8WYN0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATG4AQ8WYN0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATG4AQ8WYN0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATG4AQ8WYN0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATG4AQ8WYN0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATG4AQ8WYN0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.69■□□□□ 0.74
ATG4AQ8WYN0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATG4AQ8WYN0 AL390961.4-201ENST00000623958 2535 ntBASIC19.69■□□□□ 0.74
ATG4AQ8WYN0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.69■□□□□ 0.74
ATG4AQ8WYN0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.69■□□□□ 0.74
ATG4AQ8WYN0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATG4AQ8WYN0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATG4AQ8WYN0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ATG4AQ8WYN0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATG4AQ8WYN0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATG4AQ8WYN0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.69■□□□□ 0.74
ATG4AQ8WYN0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATG4AQ8WYN0 HLA-L-209ENST00000420110 1011 ntBASIC19.69■□□□□ 0.74
ATG4AQ8WYN0 AL160286.2-201ENST00000567150 934 ntBASIC19.69■□□□□ 0.74
ATG4AQ8WYN0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.69■□□□□ 0.74
ATG4AQ8WYN0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATG4AQ8WYN0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATG4AQ8WYN0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATG4AQ8WYN0 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
ATG4AQ8WYN0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATG4AQ8WYN0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATG4AQ8WYN0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATG4AQ8WYN0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
ATG4AQ8WYN0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATG4AQ8WYN0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.69■□□□□ 0.74
ATG4AQ8WYN0 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ATG4AQ8WYN0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATG4AQ8WYN0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.68■□□□□ 0.74
ATG4AQ8WYN0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
ATG4AQ8WYN0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATG4AQ8WYN0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ATG4AQ8WYN0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATG4AQ8WYN0 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.68■□□□□ 0.74
ATG4AQ8WYN0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATG4AQ8WYN0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATG4AQ8WYN0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATG4AQ8WYN0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.68■□□□□ 0.74
ATG4AQ8WYN0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.68■□□□□ 0.74
ATG4AQ8WYN0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.68■□□□□ 0.74
ATG4AQ8WYN0 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.68■□□□□ 0.74
ATG4AQ8WYN0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.68■□□□□ 0.74
ATG4AQ8WYN0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATG4AQ8WYN0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATG4AQ8WYN0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.68■□□□□ 0.74
ATG4AQ8WYN0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.68■□□□□ 0.74
ATG4AQ8WYN0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.68■□□□□ 0.74
ATG4AQ8WYN0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATG4AQ8WYN0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
ATG4AQ8WYN0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.68■□□□□ 0.74
ATG4AQ8WYN0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATG4AQ8WYN0 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATG4AQ8WYN0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.68■□□□□ 0.74
ATG4AQ8WYN0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms