Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC44A1Q8WWI5 TSPY23P-201ENST00000440136 739 ntBASIC19.06■□□□□ 0.64
SLC44A1Q8WWI5 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.06■□□□□ 0.64
SLC44A1Q8WWI5 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.06■□□□□ 0.64
SLC44A1Q8WWI5 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.06■□□□□ 0.64
SLC44A1Q8WWI5 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.06■□□□□ 0.64
SLC44A1Q8WWI5 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SLC44A1Q8WWI5 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC44A1Q8WWI5 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC44A1Q8WWI5 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC44A1Q8WWI5 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC44A1Q8WWI5 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.06■□□□□ 0.64
SLC44A1Q8WWI5 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC44A1Q8WWI5 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC44A1Q8WWI5 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SLC44A1Q8WWI5 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC44A1Q8WWI5 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC44A1Q8WWI5 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC44A1Q8WWI5 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A1Q8WWI5 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
SLC44A1Q8WWI5 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A1Q8WWI5 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SLC44A1Q8WWI5 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SLC44A1Q8WWI5 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A1Q8WWI5 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A1Q8WWI5 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A1Q8WWI5 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A1Q8WWI5 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SLC44A1Q8WWI5 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A1Q8WWI5 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A1Q8WWI5 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A1Q8WWI5 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.05■□□□□ 0.64
SLC44A1Q8WWI5 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A1Q8WWI5 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A1Q8WWI5 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A1Q8WWI5 SOX15-203ENST00000570788 1093 ntBASIC19.05■□□□□ 0.64
SLC44A1Q8WWI5 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.05■□□□□ 0.64
SLC44A1Q8WWI5 AC008687.6-201ENST00000596318 630 ntBASIC19.05■□□□□ 0.64
SLC44A1Q8WWI5 AC083880.1-201ENST00000608266 535 ntBASIC19.05■□□□□ 0.64
SLC44A1Q8WWI5 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A1Q8WWI5 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.05■□□□□ 0.64
SLC44A1Q8WWI5 ABALON-201ENST00000629058 1903 ntBASIC19.05■□□□□ 0.64
SLC44A1Q8WWI5 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.05■□□□□ 0.64
SLC44A1Q8WWI5 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SLC44A1Q8WWI5 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.05■□□□□ 0.64
SLC44A1Q8WWI5 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.05■□□□□ 0.64
SLC44A1Q8WWI5 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A1Q8WWI5 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC44A1Q8WWI5 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC44A1Q8WWI5 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC44A1Q8WWI5 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC44A1Q8WWI5 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC44A1Q8WWI5 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC44A1Q8WWI5 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SLC44A1Q8WWI5 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.04■□□□□ 0.64
SLC44A1Q8WWI5 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC44A1Q8WWI5 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC44A1Q8WWI5 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC44A1Q8WWI5 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.04■□□□□ 0.64
SLC44A1Q8WWI5 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC44A1Q8WWI5 NCF1B-203ENST00000435988 1254 ntBASIC19.04■□□□□ 0.64
SLC44A1Q8WWI5 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.04■□□□□ 0.64
SLC44A1Q8WWI5 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.04■□□□□ 0.64
SLC44A1Q8WWI5 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.04■□□□□ 0.64
SLC44A1Q8WWI5 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.04■□□□□ 0.64
SLC44A1Q8WWI5 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC44A1Q8WWI5 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.04■□□□□ 0.64
SLC44A1Q8WWI5 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.04■□□□□ 0.64
SLC44A1Q8WWI5 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC44A1Q8WWI5 AC126763.1-201ENST00000552015 2118 ntBASIC19.04■□□□□ 0.64
SLC44A1Q8WWI5 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC44A1Q8WWI5 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC44A1Q8WWI5 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC44A1Q8WWI5 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC44A1Q8WWI5 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.04■□□□□ 0.64
SLC44A1Q8WWI5 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC44A1Q8WWI5 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SLC44A1Q8WWI5 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.03■□□□□ 0.64
SLC44A1Q8WWI5 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.03■□□□□ 0.64
SLC44A1Q8WWI5 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.03■□□□□ 0.64
SLC44A1Q8WWI5 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SLC44A1Q8WWI5 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.03■□□□□ 0.64
SLC44A1Q8WWI5 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC44A1Q8WWI5 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC44A1Q8WWI5 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.03■□□□□ 0.64
SLC44A1Q8WWI5 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.03■□□□□ 0.64
SLC44A1Q8WWI5 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
SLC44A1Q8WWI5 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.03■□□□□ 0.64
SLC44A1Q8WWI5 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SLC44A1Q8WWI5 AL160286.2-201ENST00000567150 934 ntBASIC19.03■□□□□ 0.64
SLC44A1Q8WWI5 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC44A1Q8WWI5 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.03■□□□□ 0.64
SLC44A1Q8WWI5 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC44A1Q8WWI5 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SLC44A1Q8WWI5 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC44A1Q8WWI5 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.03■□□□□ 0.64
SLC44A1Q8WWI5 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SLC44A1Q8WWI5 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SLC44A1Q8WWI5 AC068880.1-201ENST00000507289 2297 ntBASIC19.03■□□□□ 0.64
SLC44A1Q8WWI5 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms