Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 SEC1P-202ENST00000473944 940 ntBASIC14.78□□□□□ -0.04
LINC01006Q8NI28 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 LINC01006-201ENST00000333319 2292 ntBASIC14.78□□□□□ -0.04
LINC01006Q8NI28 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.78□□□□□ -0.04
LINC01006Q8NI28 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01006Q8NI28 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.77□□□□□ -0.04
LINC01006Q8NI28 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01006Q8NI28 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01006Q8NI28 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01006Q8NI28 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01006Q8NI28 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.77□□□□□ -0.04
LINC01006Q8NI28 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01006Q8NI28 AC016734.2-201ENST00000624325 1377 ntBASIC14.77□□□□□ -0.04
LINC01006Q8NI28 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01006Q8NI28 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC01006Q8NI28 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.77□□□□□ -0.05
LINC01006Q8NI28 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.77□□□□□ -0.05
LINC01006Q8NI28 PRELID1P1-202ENST00000567272 903 ntBASIC14.77□□□□□ -0.05
LINC01006Q8NI28 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.77□□□□□ -0.05
LINC01006Q8NI28 AC112497.1-201ENST00000624824 639 ntBASIC14.77□□□□□ -0.05
LINC01006Q8NI28 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.77□□□□□ -0.05
LINC01006Q8NI28 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC01006Q8NI28 CLDN5-201ENST00000403084 2357 ntBASIC14.77□□□□□ -0.05
LINC01006Q8NI28 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LINC01006Q8NI28 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC14.77□□□□□ -0.05
LINC01006Q8NI28 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LINC01006Q8NI28 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
LINC01006Q8NI28 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 AC112907.3-201ENST00000577781 2400 ntBASIC14.76□□□□□ -0.05
LINC01006Q8NI28 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC01006Q8NI28 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
LINC01006Q8NI28 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01006Q8NI28 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01006Q8NI28 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
LINC01006Q8NI28 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC14.75□□□□□ -0.05
LINC01006Q8NI28 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01006Q8NI28 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
LINC01006Q8NI28 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.75□□□□□ -0.05
LINC01006Q8NI28 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.75□□□□□ -0.05
LINC01006Q8NI28 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.75□□□□□ -0.05
LINC01006Q8NI28 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.75□□□□□ -0.05
LINC01006Q8NI28 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
LINC01006Q8NI28 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms