Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC22.1■■□□□ 1.13
PNMA1Q8ND90 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
PNMA1Q8ND90 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC22.1■■□□□ 1.13
PNMA1Q8ND90 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
PNMA1Q8ND90 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
PNMA1Q8ND90 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC22.1■■□□□ 1.13
PNMA1Q8ND90 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PNMA1Q8ND90 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PNMA1Q8ND90 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PNMA1Q8ND90 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC22.09■■□□□ 1.13
PNMA1Q8ND90 PTGES2-AS1-201ENST00000443493 2100 ntBASIC22.09■■□□□ 1.13
PNMA1Q8ND90 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
PNMA1Q8ND90 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC22.09■■□□□ 1.13
PNMA1Q8ND90 LIN28AP1-201ENST00000429574 405 ntBASIC22.09■■□□□ 1.13
PNMA1Q8ND90 GPX4-207ENST00000589115 812 ntTSL 2 BASIC22.09■■□□□ 1.13
PNMA1Q8ND90 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PNMA1Q8ND90 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
PNMA1Q8ND90 AL161938.1-201ENST00000569833 2180 ntBASIC22.09■■□□□ 1.13
PNMA1Q8ND90 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
PNMA1Q8ND90 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
PNMA1Q8ND90 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PNMA1Q8ND90 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PNMA1Q8ND90 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PNMA1Q8ND90 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PNMA1Q8ND90 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
PNMA1Q8ND90 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PNMA1Q8ND90 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PNMA1Q8ND90 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
PNMA1Q8ND90 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PNMA1Q8ND90 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.13
PNMA1Q8ND90 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PNMA1Q8ND90 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PNMA1Q8ND90 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PNMA1Q8ND90 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC22.08■■□□□ 1.13
PNMA1Q8ND90 TMPOP1-202ENST00000424642 1267 ntBASIC22.08■■□□□ 1.13
PNMA1Q8ND90 ATP5G1P1-201ENST00000448724 379 ntBASIC22.08■■□□□ 1.13
PNMA1Q8ND90 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC22.08■■□□□ 1.13
PNMA1Q8ND90 CFL2-205ENST00000555765 632 ntTSL 2 BASIC22.08■■□□□ 1.13
PNMA1Q8ND90 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC22.08■■□□□ 1.13
PNMA1Q8ND90 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
PNMA1Q8ND90 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC22.08■■□□□ 1.13
PNMA1Q8ND90 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PNMA1Q8ND90 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC22.08■■□□□ 1.13
PNMA1Q8ND90 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC22.08■■□□□ 1.12
PNMA1Q8ND90 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PNMA1Q8ND90 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PNMA1Q8ND90 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PNMA1Q8ND90 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PNMA1Q8ND90 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC22.07■■□□□ 1.12
PNMA1Q8ND90 GPAT2P1-201ENST00000444924 1672 ntBASIC22.07■■□□□ 1.12
PNMA1Q8ND90 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PNMA1Q8ND90 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PNMA1Q8ND90 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC22.07■■□□□ 1.12
PNMA1Q8ND90 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC22.07■■□□□ 1.12
PNMA1Q8ND90 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PNMA1Q8ND90 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC22.07■■□□□ 1.12
PNMA1Q8ND90 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PNMA1Q8ND90 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PNMA1Q8ND90 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PNMA1Q8ND90 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC22.07■■□□□ 1.12
PNMA1Q8ND90 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC22.07■■□□□ 1.12
PNMA1Q8ND90 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PNMA1Q8ND90 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
PNMA1Q8ND90 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC22.07■■□□□ 1.12
PNMA1Q8ND90 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PNMA1Q8ND90 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC22.07■■□□□ 1.12
PNMA1Q8ND90 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PNMA1Q8ND90 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
PNMA1Q8ND90 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PNMA1Q8ND90 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PNMA1Q8ND90 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
PNMA1Q8ND90 LGALS8-AS1-201ENST00000487567 1457 ntBASIC22.07■■□□□ 1.12
PNMA1Q8ND90 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PNMA1Q8ND90 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC22.07■■□□□ 1.12
PNMA1Q8ND90 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC22.07■■□□□ 1.12
PNMA1Q8ND90 KRT8P45-201ENST00000414328 1447 ntBASIC22.06■■□□□ 1.12
PNMA1Q8ND90 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
PNMA1Q8ND90 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PNMA1Q8ND90 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC22.06■■□□□ 1.12
PNMA1Q8ND90 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC22.06■■□□□ 1.12
PNMA1Q8ND90 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PNMA1Q8ND90 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PNMA1Q8ND90 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PNMA1Q8ND90 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PNMA1Q8ND90 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC22.06■■□□□ 1.12
PNMA1Q8ND90 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC22.06■■□□□ 1.12
PNMA1Q8ND90 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC22.06■■□□□ 1.12
PNMA1Q8ND90 AL138966.2-201ENST00000621997 464 ntBASIC22.06■■□□□ 1.12
PNMA1Q8ND90 KATNBL1P6-202ENST00000562413 1466 ntBASIC22.06■■□□□ 1.12
PNMA1Q8ND90 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC22.06■■□□□ 1.12
PNMA1Q8ND90 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC22.06■■□□□ 1.12
PNMA1Q8ND90 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
PNMA1Q8ND90 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PNMA1Q8ND90 AL049812.1-201ENST00000432563 2267 ntBASIC22.06■■□□□ 1.12
PNMA1Q8ND90 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PNMA1Q8ND90 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC22.06■■□□□ 1.12
PNMA1Q8ND90 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PNMA1Q8ND90 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC22.06■■□□□ 1.12
PNMA1Q8ND90 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
PNMA1Q8ND90 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms