Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.3■□□□□ 0.52
LINC01555Q8NAE3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01555Q8NAE3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01555Q8NAE3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01555Q8NAE3 KRT18P22-201ENST00000402024 1347 ntBASIC18.29■□□□□ 0.52
LINC01555Q8NAE3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01555Q8NAE3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01555Q8NAE3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.29■□□□□ 0.52
LINC01555Q8NAE3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01555Q8NAE3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.29■□□□□ 0.52
LINC01555Q8NAE3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01555Q8NAE3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.29■□□□□ 0.52
LINC01555Q8NAE3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.29■□□□□ 0.52
LINC01555Q8NAE3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.29■□□□□ 0.52
LINC01555Q8NAE3 AP003041.3-201ENST00000527151 707 ntBASIC18.29■□□□□ 0.52
LINC01555Q8NAE3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.29■□□□□ 0.52
LINC01555Q8NAE3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01555Q8NAE3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
LINC01555Q8NAE3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01555Q8NAE3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01555Q8NAE3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.29■□□□□ 0.52
LINC01555Q8NAE3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.29■□□□□ 0.52
LINC01555Q8NAE3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.29■□□□□ 0.52
LINC01555Q8NAE3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01555Q8NAE3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01555Q8NAE3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
LINC01555Q8NAE3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.28■□□□□ 0.52
LINC01555Q8NAE3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.28■□□□□ 0.52
LINC01555Q8NAE3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.28■□□□□ 0.52
LINC01555Q8NAE3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LINC01555Q8NAE3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC01555Q8NAE3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC01555Q8NAE3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LINC01555Q8NAE3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC01555Q8NAE3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LINC01555Q8NAE3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC01555Q8NAE3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
LINC01555Q8NAE3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
LINC01555Q8NAE3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC01555Q8NAE3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC01555Q8NAE3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.28■□□□□ 0.52
LINC01555Q8NAE3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.28■□□□□ 0.52
LINC01555Q8NAE3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.28■□□□□ 0.52
LINC01555Q8NAE3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.28■□□□□ 0.52
LINC01555Q8NAE3 MIR4674-201ENST00000582457 87 ntBASIC18.28■□□□□ 0.52
LINC01555Q8NAE3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.28■□□□□ 0.52
LINC01555Q8NAE3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.28■□□□□ 0.52
LINC01555Q8NAE3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LINC01555Q8NAE3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC01555Q8NAE3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC01555Q8NAE3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC01555Q8NAE3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.28■□□□□ 0.52
LINC01555Q8NAE3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC01555Q8NAE3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.28■□□□□ 0.52
LINC01555Q8NAE3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.28■□□□□ 0.52
LINC01555Q8NAE3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC01555Q8NAE3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LINC01555Q8NAE3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LINC01555Q8NAE3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LINC01555Q8NAE3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
LINC01555Q8NAE3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LINC01555Q8NAE3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.27■□□□□ 0.52
LINC01555Q8NAE3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.27■□□□□ 0.52
LINC01555Q8NAE3 AC128688.1-201ENST00000487626 519 ntBASIC18.27■□□□□ 0.52
LINC01555Q8NAE3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LINC01555Q8NAE3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LINC01555Q8NAE3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.27■□□□□ 0.52
LINC01555Q8NAE3 AC010653.2-201ENST00000623505 997 ntBASIC18.27■□□□□ 0.52
LINC01555Q8NAE3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
LINC01555Q8NAE3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LINC01555Q8NAE3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LINC01555Q8NAE3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.27■□□□□ 0.51
LINC01555Q8NAE3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
LINC01555Q8NAE3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LINC01555Q8NAE3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01555Q8NAE3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01555Q8NAE3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01555Q8NAE3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
LINC01555Q8NAE3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
LINC01555Q8NAE3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01555Q8NAE3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01555Q8NAE3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LINC01555Q8NAE3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.26■□□□□ 0.51
LINC01555Q8NAE3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.26■□□□□ 0.51
LINC01555Q8NAE3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
LINC01555Q8NAE3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.26■□□□□ 0.51
LINC01555Q8NAE3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01555Q8NAE3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.26■□□□□ 0.51
LINC01555Q8NAE3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01555Q8NAE3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01555Q8NAE3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01555Q8NAE3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01555Q8NAE3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
LINC01555Q8NAE3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.26■□□□□ 0.51
LINC01555Q8NAE3 AL512353.2-201ENST00000448759 1962 ntBASIC18.26■□□□□ 0.51
LINC01555Q8NAE3 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.26■□□□□ 0.51
LINC01555Q8NAE3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01555Q8NAE3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01555Q8NAE3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01555Q8NAE3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms