Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC33Q8N5R6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CCDC33Q8N5R6 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC33Q8N5R6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CCDC33Q8N5R6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC33Q8N5R6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC33Q8N5R6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC33Q8N5R6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC33Q8N5R6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
CCDC33Q8N5R6 AC004980.1-204ENST00000429707 299 ntBASIC19.92■□□□□ 0.78
CCDC33Q8N5R6 AC104076.2-201ENST00000448912 469 ntBASIC19.92■□□□□ 0.78
CCDC33Q8N5R6 ECEL1P2-202ENST00000465689 757 ntBASIC19.92■□□□□ 0.78
CCDC33Q8N5R6 AC097488.1-201ENST00000507834 756 ntBASIC19.92■□□□□ 0.78
CCDC33Q8N5R6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC33Q8N5R6 AC010203.1-204ENST00000548782 407 ntBASIC19.92■□□□□ 0.78
CCDC33Q8N5R6 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC33Q8N5R6 C2orf69P3-201ENST00000565542 1120 ntBASIC19.92■□□□□ 0.78
CCDC33Q8N5R6 AC026271.3-201ENST00000571884 352 ntBASIC19.92■□□□□ 0.78
CCDC33Q8N5R6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CCDC33Q8N5R6 AC104417.2-201ENST00000562989 1793 ntBASIC19.92■□□□□ 0.78
CCDC33Q8N5R6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC33Q8N5R6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CCDC33Q8N5R6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC33Q8N5R6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC33Q8N5R6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC33Q8N5R6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC33Q8N5R6 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CCDC33Q8N5R6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC33Q8N5R6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC33Q8N5R6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC33Q8N5R6 TEX21P-204ENST00000641479 1693 ntBASIC19.91■□□□□ 0.78
CCDC33Q8N5R6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC33Q8N5R6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC33Q8N5R6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC33Q8N5R6 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC33Q8N5R6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC33Q8N5R6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC33Q8N5R6 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC33Q8N5R6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC33Q8N5R6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC33Q8N5R6 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC33Q8N5R6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC33Q8N5R6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC33Q8N5R6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC33Q8N5R6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC33Q8N5R6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CCDC33Q8N5R6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CCDC33Q8N5R6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC33Q8N5R6 AC131212.4-201ENST00000623606 975 ntBASIC19.91■□□□□ 0.78
CCDC33Q8N5R6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CCDC33Q8N5R6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC33Q8N5R6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC33Q8N5R6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC33Q8N5R6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC33Q8N5R6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC33Q8N5R6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC33Q8N5R6 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC33Q8N5R6 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 AL049812.1-201ENST00000432563 2267 ntBASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 LIN28AP1-201ENST00000429574 405 ntBASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC33Q8N5R6 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC33Q8N5R6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
CCDC33Q8N5R6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC33Q8N5R6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.89■□□□□ 0.77
CCDC33Q8N5R6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC33Q8N5R6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC33Q8N5R6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC33Q8N5R6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC33Q8N5R6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC33Q8N5R6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
CCDC33Q8N5R6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms