Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
ARHGEF28Q8N1W1 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ARHGEF28Q8N1W1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
ARHGEF28Q8N1W1 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
ARHGEF28Q8N1W1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC26.36■■□□□ 1.81
ARHGEF28Q8N1W1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC26.36■■□□□ 1.81
ARHGEF28Q8N1W1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ARHGEF28Q8N1W1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
ARHGEF28Q8N1W1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC26.35■■□□□ 1.81
ARHGEF28Q8N1W1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ARHGEF28Q8N1W1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC26.35■■□□□ 1.81
ARHGEF28Q8N1W1 WDR88-203ENST00000592765 651 ntTSL 5 BASIC26.35■■□□□ 1.81
ARHGEF28Q8N1W1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC26.35■■□□□ 1.81
ARHGEF28Q8N1W1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC26.35■■□□□ 1.81
ARHGEF28Q8N1W1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
ARHGEF28Q8N1W1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ARHGEF28Q8N1W1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC26.35■■□□□ 1.81
ARHGEF28Q8N1W1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ARHGEF28Q8N1W1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ARHGEF28Q8N1W1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
ARHGEF28Q8N1W1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ARHGEF28Q8N1W1 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC26.34■■□□□ 1.81
ARHGEF28Q8N1W1 AL450487.1-201ENST00000426799 995 ntBASIC26.34■■□□□ 1.81
ARHGEF28Q8N1W1 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC26.34■■□□□ 1.81
ARHGEF28Q8N1W1 BCL10-202ENST00000620248 774 ntTSL 5 BASIC26.34■■□□□ 1.81
ARHGEF28Q8N1W1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ARHGEF28Q8N1W1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ARHGEF28Q8N1W1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC26.34■■□□□ 1.81
ARHGEF28Q8N1W1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ARHGEF28Q8N1W1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ARHGEF28Q8N1W1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC26.34■■□□□ 1.81
ARHGEF28Q8N1W1 AL136038.4-201ENST00000603606 1261 ntBASIC26.34■■□□□ 1.81
ARHGEF28Q8N1W1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ARHGEF28Q8N1W1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
ARHGEF28Q8N1W1 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC26.33■■□□□ 1.81
ARHGEF28Q8N1W1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
ARHGEF28Q8N1W1 AL109659.2-201ENST00000606809 1674 ntBASIC26.33■■□□□ 1.81
ARHGEF28Q8N1W1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ARHGEF28Q8N1W1 AL512353.2-201ENST00000448759 1962 ntBASIC26.33■■□□□ 1.81
ARHGEF28Q8N1W1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ARHGEF28Q8N1W1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC26.33■■□□□ 1.81
ARHGEF28Q8N1W1 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
ARHGEF28Q8N1W1 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ARHGEF28Q8N1W1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC26.33■■□□□ 1.81
ARHGEF28Q8N1W1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC26.33■■□□□ 1.81
ARHGEF28Q8N1W1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC26.32■■□□□ 1.8
ARHGEF28Q8N1W1 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ARHGEF28Q8N1W1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC26.32■■□□□ 1.8
ARHGEF28Q8N1W1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC26.32■■□□□ 1.8
ARHGEF28Q8N1W1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
ARHGEF28Q8N1W1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ARHGEF28Q8N1W1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC26.32■■□□□ 1.8
ARHGEF28Q8N1W1 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC26.32■■□□□ 1.8
ARHGEF28Q8N1W1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC26.32■■□□□ 1.8
ARHGEF28Q8N1W1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC26.32■■□□□ 1.8
ARHGEF28Q8N1W1 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ARHGEF28Q8N1W1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC26.31■■□□□ 1.8
ARHGEF28Q8N1W1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ARHGEF28Q8N1W1 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ARHGEF28Q8N1W1 UBQLN4P1-201ENST00000461599 1801 ntBASIC26.31■■□□□ 1.8
ARHGEF28Q8N1W1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ARHGEF28Q8N1W1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ARHGEF28Q8N1W1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC26.31■■□□□ 1.8
ARHGEF28Q8N1W1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ARHGEF28Q8N1W1 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC26.31■■□□□ 1.8
ARHGEF28Q8N1W1 KRT126P-201ENST00000549467 1181 ntBASIC26.31■■□□□ 1.8
ARHGEF28Q8N1W1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ARHGEF28Q8N1W1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
ARHGEF28Q8N1W1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ARHGEF28Q8N1W1 AL391807.1-203ENST00000604392 2365 ntBASIC26.3■■□□□ 1.8
ARHGEF28Q8N1W1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC26.3■■□□□ 1.8
ARHGEF28Q8N1W1 AL162741.1-201ENST00000565563 1558 ntBASIC26.3■■□□□ 1.8
ARHGEF28Q8N1W1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ARHGEF28Q8N1W1 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ARHGEF28Q8N1W1 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC26.3■■□□□ 1.8
ARHGEF28Q8N1W1 IRX1P1-201ENST00000438849 1838 ntBASIC26.3■■□□□ 1.8
ARHGEF28Q8N1W1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
ARHGEF28Q8N1W1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ARHGEF28Q8N1W1 AC008556.1-201ENST00000610908 2040 ntBASIC26.3■■□□□ 1.8
ARHGEF28Q8N1W1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
ARHGEF28Q8N1W1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
ARHGEF28Q8N1W1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC26.3■■□□□ 1.8
ARHGEF28Q8N1W1 AC010240.3-201ENST00000607688 395 ntBASIC26.3■■□□□ 1.8
ARHGEF28Q8N1W1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
ARHGEF28Q8N1W1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
ARHGEF28Q8N1W1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ARHGEF28Q8N1W1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
ARHGEF28Q8N1W1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ARHGEF28Q8N1W1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
ARHGEF28Q8N1W1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ARHGEF28Q8N1W1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
ARHGEF28Q8N1W1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
ARHGEF28Q8N1W1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
ARHGEF28Q8N1W1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
ARHGEF28Q8N1W1 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC26.29■■□□□ 1.8
ARHGEF28Q8N1W1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC26.29■■□□□ 1.8
ARHGEF28Q8N1W1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
ARHGEF28Q8N1W1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ARHGEF28Q8N1W1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ARHGEF28Q8N1W1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms