Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 AC007613.1-201ENST00000572811 2597 ntBASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 AC004980.1-204ENST00000429707 299 ntBASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 TSPY21P-201ENST00000433481 731 ntBASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 AC098590.1-201ENST00000468126 897 ntBASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 AC005082.1-201ENST00000413042 2259 ntBASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 AC005332.8-201ENST00000622750 2735 ntBASIC18.8■□□□□ 0.6
CPNE9Q8IYJ1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE9Q8IYJ1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE9Q8IYJ1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
CPNE9Q8IYJ1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE9Q8IYJ1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE9Q8IYJ1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
CPNE9Q8IYJ1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.8■□□□□ 0.6
CPNE9Q8IYJ1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CPNE9Q8IYJ1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CPNE9Q8IYJ1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.8■□□□□ 0.6
CPNE9Q8IYJ1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CPNE9Q8IYJ1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.8■□□□□ 0.6
CPNE9Q8IYJ1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE9Q8IYJ1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.8■□□□□ 0.6
CPNE9Q8IYJ1 AL353708.3-201ENST00000610272 989 ntBASIC18.8■□□□□ 0.6
CPNE9Q8IYJ1 AC131212.4-201ENST00000623606 975 ntBASIC18.8■□□□□ 0.6
CPNE9Q8IYJ1 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE9Q8IYJ1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
CPNE9Q8IYJ1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
CPNE9Q8IYJ1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.8■□□□□ 0.6
CPNE9Q8IYJ1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE9Q8IYJ1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE9Q8IYJ1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE9Q8IYJ1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE9Q8IYJ1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE9Q8IYJ1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE9Q8IYJ1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE9Q8IYJ1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE9Q8IYJ1 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.79■□□□□ 0.6
CPNE9Q8IYJ1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE9Q8IYJ1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE9Q8IYJ1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE9Q8IYJ1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE9Q8IYJ1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.79■□□□□ 0.6
CPNE9Q8IYJ1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE9Q8IYJ1 AL353807.1-201ENST00000427475 662 ntBASIC18.79■□□□□ 0.6
CPNE9Q8IYJ1 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE9Q8IYJ1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.79■□□□□ 0.6
CPNE9Q8IYJ1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE9Q8IYJ1 AC142381.4-202ENST00000563973 229 ntBASIC18.79■□□□□ 0.6
CPNE9Q8IYJ1 RARRES2P10-201ENST00000564312 460 ntBASIC18.79■□□□□ 0.6
CPNE9Q8IYJ1 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE9Q8IYJ1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE9Q8IYJ1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE9Q8IYJ1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE9Q8IYJ1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CPNE9Q8IYJ1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE9Q8IYJ1 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.78■□□□□ 0.6
CPNE9Q8IYJ1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
CPNE9Q8IYJ1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE9Q8IYJ1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CPNE9Q8IYJ1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE9Q8IYJ1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE9Q8IYJ1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.78■□□□□ 0.6
CPNE9Q8IYJ1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE9Q8IYJ1 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE9Q8IYJ1 ABHD17AP1-201ENST00000358206 933 ntBASIC18.78■□□□□ 0.6
CPNE9Q8IYJ1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.78■□□□□ 0.6
CPNE9Q8IYJ1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.78■□□□□ 0.6
CPNE9Q8IYJ1 KSR1P1-201ENST00000446298 240 ntBASIC18.78■□□□□ 0.6
CPNE9Q8IYJ1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE9Q8IYJ1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.78■□□□□ 0.6
CPNE9Q8IYJ1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE9Q8IYJ1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.78■□□□□ 0.6
CPNE9Q8IYJ1 AF186192.3-201ENST00000583427 947 ntBASIC18.78■□□□□ 0.6
CPNE9Q8IYJ1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.78■□□□□ 0.6
CPNE9Q8IYJ1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.78■□□□□ 0.6
CPNE9Q8IYJ1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.78■□□□□ 0.6
CPNE9Q8IYJ1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.78■□□□□ 0.6
CPNE9Q8IYJ1 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms