Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT39Q6A163 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.54■□□□□ 0.88
KRT39Q6A163 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT39Q6A163 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT39Q6A163 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT39Q6A163 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT39Q6A163 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
KRT39Q6A163 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.54■□□□□ 0.88
KRT39Q6A163 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.54■□□□□ 0.88
KRT39Q6A163 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.54■□□□□ 0.88
KRT39Q6A163 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.54■□□□□ 0.88
KRT39Q6A163 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT39Q6A163 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.54■□□□□ 0.88
KRT39Q6A163 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT39Q6A163 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT39Q6A163 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT39Q6A163 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT39Q6A163 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT39Q6A163 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
KRT39Q6A163 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.54■□□□□ 0.88
KRT39Q6A163 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.53■□□□□ 0.88
KRT39Q6A163 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.53■□□□□ 0.88
KRT39Q6A163 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
KRT39Q6A163 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT39Q6A163 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
KRT39Q6A163 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT39Q6A163 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
KRT39Q6A163 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
KRT39Q6A163 TSPY7P-201ENST00000431358 1114 ntBASIC20.53■□□□□ 0.88
KRT39Q6A163 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT39Q6A163 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.53■□□□□ 0.88
KRT39Q6A163 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.53■□□□□ 0.88
KRT39Q6A163 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRT39Q6A163 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.53■□□□□ 0.88
KRT39Q6A163 AP003071.4-201ENST00000562276 1284 ntBASIC20.53■□□□□ 0.88
KRT39Q6A163 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.53■□□□□ 0.88
KRT39Q6A163 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
KRT39Q6A163 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.53■□□□□ 0.88
KRT39Q6A163 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT39Q6A163 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT39Q6A163 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRT39Q6A163 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT39Q6A163 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
KRT39Q6A163 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT39Q6A163 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
KRT39Q6A163 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.53■□□□□ 0.88
KRT39Q6A163 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
KRT39Q6A163 AC096733.2-201ENST00000609937 1394 ntBASIC20.52■□□□□ 0.88
KRT39Q6A163 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KRT39Q6A163 MIR4785-201ENST00000585005 73 ntBASIC20.52■□□□□ 0.88
KRT39Q6A163 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.52■□□□□ 0.88
KRT39Q6A163 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.52■□□□□ 0.88
KRT39Q6A163 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
KRT39Q6A163 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.52■□□□□ 0.87
KRT39Q6A163 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.87
KRT39Q6A163 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.52■□□□□ 0.87
KRT39Q6A163 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRT39Q6A163 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRT39Q6A163 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
KRT39Q6A163 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRT39Q6A163 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRT39Q6A163 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRT39Q6A163 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.51■□□□□ 0.87
KRT39Q6A163 SNORA78-201ENST00000459373 127 ntBASIC20.51■□□□□ 0.87
KRT39Q6A163 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.51■□□□□ 0.87
KRT39Q6A163 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.51■□□□□ 0.87
KRT39Q6A163 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.51■□□□□ 0.87
KRT39Q6A163 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRT39Q6A163 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KRT39Q6A163 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KRT39Q6A163 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KRT39Q6A163 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRT39Q6A163 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KRT39Q6A163 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRT39Q6A163 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.51■□□□□ 0.87
KRT39Q6A163 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.51■□□□□ 0.87
KRT39Q6A163 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRT39Q6A163 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRT39Q6A163 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRT39Q6A163 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRT39Q6A163 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRT39Q6A163 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.5■□□□□ 0.87
KRT39Q6A163 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRT39Q6A163 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
KRT39Q6A163 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
KRT39Q6A163 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KRT39Q6A163 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.5■□□□□ 0.87
KRT39Q6A163 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.5■□□□□ 0.87
KRT39Q6A163 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.5■□□□□ 0.87
KRT39Q6A163 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KRT39Q6A163 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.5■□□□□ 0.87
KRT39Q6A163 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
KRT39Q6A163 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KRT39Q6A163 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KRT39Q6A163 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRT39Q6A163 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.49■□□□□ 0.87
KRT39Q6A163 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
KRT39Q6A163 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT39Q6A163 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.49■□□□□ 0.87
KRT39Q6A163 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms