Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
LINC00242Q5T6M2 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC13□□□□□ -0.33
LINC00242Q5T6M2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00242Q5T6M2 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
LINC00242Q5T6M2 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00242Q5T6M2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC13□□□□□ -0.33
LINC00242Q5T6M2 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00242Q5T6M2 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00242Q5T6M2 AP000997.3-201ENST00000623333 2250 ntBASIC13□□□□□ -0.33
LINC00242Q5T6M2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00242Q5T6M2 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC13□□□□□ -0.33
LINC00242Q5T6M2 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00242Q5T6M2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00242Q5T6M2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC00242Q5T6M2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00242Q5T6M2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00242Q5T6M2 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00242Q5T6M2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC13□□□□□ -0.33
LINC00242Q5T6M2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13□□□□□ -0.33
LINC00242Q5T6M2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
LINC00242Q5T6M2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC00242Q5T6M2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
LINC00242Q5T6M2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC13□□□□□ -0.33
LINC00242Q5T6M2 GGT1-206ENST00000404223 952 ntTSL 2 BASIC13□□□□□ -0.33
LINC00242Q5T6M2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC13□□□□□ -0.33
LINC00242Q5T6M2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC13□□□□□ -0.33
LINC00242Q5T6M2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC13□□□□□ -0.33
LINC00242Q5T6M2 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00242Q5T6M2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC00242Q5T6M2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC13□□□□□ -0.33
LINC00242Q5T6M2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC13□□□□□ -0.33
LINC00242Q5T6M2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
LINC00242Q5T6M2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC13□□□□□ -0.33
LINC00242Q5T6M2 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00242Q5T6M2 MIR6821-201ENST00000617625 74 ntBASIC13□□□□□ -0.33
LINC00242Q5T6M2 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00242Q5T6M2 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
LINC00242Q5T6M2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC13□□□□□ -0.33
LINC00242Q5T6M2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00242Q5T6M2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00242Q5T6M2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00242Q5T6M2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC00242Q5T6M2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
LINC00242Q5T6M2 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
LINC00242Q5T6M2 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC00242Q5T6M2 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00242Q5T6M2 AC073592.3-201ENST00000625118 1834 ntBASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 MFF-205ENST00000354503 1085 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 RPS2P52-201ENST00000469610 820 ntBASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 AC087623.3-201ENST00000607047 1098 ntBASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00242Q5T6M2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
LINC00242Q5T6M2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms