Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
HERC4Q5GLZ8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
HERC4Q5GLZ8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
HERC4Q5GLZ8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.22■□□□□ 0.99
HERC4Q5GLZ8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HERC4Q5GLZ8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HERC4Q5GLZ8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.22■□□□□ 0.99
HERC4Q5GLZ8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
HERC4Q5GLZ8 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HERC4Q5GLZ8 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HERC4Q5GLZ8 AC113347.1-201ENST00000413321 391 ntBASIC21.22■□□□□ 0.99
HERC4Q5GLZ8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HERC4Q5GLZ8 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.22■□□□□ 0.99
HERC4Q5GLZ8 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.22■□□□□ 0.99
HERC4Q5GLZ8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.22■□□□□ 0.99
HERC4Q5GLZ8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.22■□□□□ 0.99
HERC4Q5GLZ8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HERC4Q5GLZ8 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.22■□□□□ 0.99
HERC4Q5GLZ8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.22■□□□□ 0.99
HERC4Q5GLZ8 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.22■□□□□ 0.99
HERC4Q5GLZ8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HERC4Q5GLZ8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HERC4Q5GLZ8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.22■□□□□ 0.99
HERC4Q5GLZ8 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
HERC4Q5GLZ8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.22■□□□□ 0.99
HERC4Q5GLZ8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HERC4Q5GLZ8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HERC4Q5GLZ8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HERC4Q5GLZ8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.22■□□□□ 0.99
HERC4Q5GLZ8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
HERC4Q5GLZ8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HERC4Q5GLZ8 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HERC4Q5GLZ8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HERC4Q5GLZ8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HERC4Q5GLZ8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HERC4Q5GLZ8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
HERC4Q5GLZ8 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HERC4Q5GLZ8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
HERC4Q5GLZ8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
HERC4Q5GLZ8 BX323043.1-201ENST00000641006 1765 ntBASIC21.21■□□□□ 0.99
HERC4Q5GLZ8 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HERC4Q5GLZ8 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HERC4Q5GLZ8 FAM197Y1-201ENST00000421178 764 ntBASIC21.21■□□□□ 0.99
HERC4Q5GLZ8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.21■□□□□ 0.99
HERC4Q5GLZ8 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
HERC4Q5GLZ8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HERC4Q5GLZ8 AL031985.4-201ENST00000642138 673 ntBASIC21.21■□□□□ 0.99
HERC4Q5GLZ8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HERC4Q5GLZ8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HERC4Q5GLZ8 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.21■□□□□ 0.99
HERC4Q5GLZ8 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.21■□□□□ 0.99
HERC4Q5GLZ8 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.21■□□□□ 0.99
HERC4Q5GLZ8 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HERC4Q5GLZ8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HERC4Q5GLZ8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
HERC4Q5GLZ8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HERC4Q5GLZ8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.21■□□□□ 0.99
HERC4Q5GLZ8 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HERC4Q5GLZ8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.21■□□□□ 0.99
HERC4Q5GLZ8 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.2■□□□□ 0.99
HERC4Q5GLZ8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.2■□□□□ 0.98
HERC4Q5GLZ8 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HERC4Q5GLZ8 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HERC4Q5GLZ8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HERC4Q5GLZ8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HERC4Q5GLZ8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HERC4Q5GLZ8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.2■□□□□ 0.98
HERC4Q5GLZ8 TSPY21P-201ENST00000433481 731 ntBASIC21.2■□□□□ 0.98
HERC4Q5GLZ8 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.2■□□□□ 0.98
HERC4Q5GLZ8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
HERC4Q5GLZ8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.2■□□□□ 0.98
HERC4Q5GLZ8 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.2■□□□□ 0.98
HERC4Q5GLZ8 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.2■□□□□ 0.98
HERC4Q5GLZ8 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.2■□□□□ 0.98
HERC4Q5GLZ8 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.2■□□□□ 0.98
HERC4Q5GLZ8 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.2■□□□□ 0.98
HERC4Q5GLZ8 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.2■□□□□ 0.98
HERC4Q5GLZ8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HERC4Q5GLZ8 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
HERC4Q5GLZ8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HERC4Q5GLZ8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HERC4Q5GLZ8 FP475955.4-201ENST00000623131 1990 ntBASIC21.19■□□□□ 0.98
HERC4Q5GLZ8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.19■□□□□ 0.98
HERC4Q5GLZ8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HERC4Q5GLZ8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HERC4Q5GLZ8 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
HERC4Q5GLZ8 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
HERC4Q5GLZ8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HERC4Q5GLZ8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HERC4Q5GLZ8 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
HERC4Q5GLZ8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.19■□□□□ 0.98
HERC4Q5GLZ8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
HERC4Q5GLZ8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.19■□□□□ 0.98
HERC4Q5GLZ8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.19■□□□□ 0.98
HERC4Q5GLZ8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HERC4Q5GLZ8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.19■□□□□ 0.98
HERC4Q5GLZ8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HERC4Q5GLZ8 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.19■□□□□ 0.98
HERC4Q5GLZ8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
HERC4Q5GLZ8 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms