Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCS1Q01581 WIZP1-201ENST00000531444 2299 ntBASIC18.32■□□□□ 0.52
HMGCS1Q01581 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCS1Q01581 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCS1Q01581 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCS1Q01581 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.32■□□□□ 0.52
HMGCS1Q01581 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCS1Q01581 TSPY23P-201ENST00000440136 739 ntBASIC18.32■□□□□ 0.52
HMGCS1Q01581 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCS1Q01581 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.32■□□□□ 0.52
HMGCS1Q01581 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
HMGCS1Q01581 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.32■□□□□ 0.52
HMGCS1Q01581 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCS1Q01581 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCS1Q01581 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HMGCS1Q01581 AC093525.10-201ENST00000625130 1569 ntBASIC18.32■□□□□ 0.52
HMGCS1Q01581 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCS1Q01581 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCS1Q01581 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.32■□□□□ 0.52
HMGCS1Q01581 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCS1Q01581 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
HMGCS1Q01581 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.32■□□□□ 0.52
HMGCS1Q01581 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCS1Q01581 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
HMGCS1Q01581 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCS1Q01581 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCS1Q01581 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCS1Q01581 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCS1Q01581 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCS1Q01581 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.31■□□□□ 0.52
HMGCS1Q01581 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCS1Q01581 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCS1Q01581 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCS1Q01581 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.31■□□□□ 0.52
HMGCS1Q01581 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.31■□□□□ 0.52
HMGCS1Q01581 TSPY20P-201ENST00000450910 630 ntBASIC18.31■□□□□ 0.52
HMGCS1Q01581 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.31■□□□□ 0.52
HMGCS1Q01581 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.31■□□□□ 0.52
HMGCS1Q01581 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.31■□□□□ 0.52
HMGCS1Q01581 Z98044.1-201ENST00000632503 1764 ntBASIC18.31■□□□□ 0.52
HMGCS1Q01581 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCS1Q01581 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.31■□□□□ 0.52
HMGCS1Q01581 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HMGCS1Q01581 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCS1Q01581 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCS1Q01581 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCS1Q01581 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.31■□□□□ 0.52
HMGCS1Q01581 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.31■□□□□ 0.52
HMGCS1Q01581 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCS1Q01581 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HMGCS1Q01581 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCS1Q01581 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCS1Q01581 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCS1Q01581 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
HMGCS1Q01581 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGCS1Q01581 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HMGCS1Q01581 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
HMGCS1Q01581 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HMGCS1Q01581 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HMGCS1Q01581 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGCS1Q01581 TSPY21P-201ENST00000433481 731 ntBASIC18.3■□□□□ 0.52
HMGCS1Q01581 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.3■□□□□ 0.52
HMGCS1Q01581 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
HMGCS1Q01581 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.3■□□□□ 0.52
HMGCS1Q01581 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.3■□□□□ 0.52
HMGCS1Q01581 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
HMGCS1Q01581 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGCS1Q01581 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGCS1Q01581 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.3■□□□□ 0.52
HMGCS1Q01581 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGCS1Q01581 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.3■□□□□ 0.52
HMGCS1Q01581 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
HMGCS1Q01581 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HMGCS1Q01581 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HMGCS1Q01581 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGCS1Q01581 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGCS1Q01581 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HMGCS1Q01581 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCS1Q01581 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.29■□□□□ 0.52
HMGCS1Q01581 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCS1Q01581 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.29■□□□□ 0.52
HMGCS1Q01581 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCS1Q01581 KRT8P41-201ENST00000533985 1514 ntBASIC18.29■□□□□ 0.52
HMGCS1Q01581 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.29■□□□□ 0.52
HMGCS1Q01581 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HMGCS1Q01581 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HMGCS1Q01581 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCS1Q01581 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
HMGCS1Q01581 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCS1Q01581 POU5F1P3-201ENST00000428824 1078 ntBASIC18.29■□□□□ 0.52
HMGCS1Q01581 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HMGCS1Q01581 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HMGCS1Q01581 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.29■□□□□ 0.52
HMGCS1Q01581 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCS1Q01581 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.29■□□□□ 0.52
HMGCS1Q01581 AC124016.1-201ENST00000609552 612 ntBASIC18.29■□□□□ 0.52
HMGCS1Q01581 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCS1Q01581 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCS1Q01581 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCS1Q01581 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms