Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 C1QBPP2-201ENST00000528754 825 ntBASIC18.69■□□□□ 0.58
CDKL1Q00532 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.69■□□□□ 0.58
CDKL1Q00532 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL1Q00532 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL1Q00532 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL1Q00532 IRX1P1-201ENST00000438849 1838 ntBASIC18.69■□□□□ 0.58
CDKL1Q00532 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.69■□□□□ 0.58
CDKL1Q00532 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL1Q00532 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL1Q00532 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL1Q00532 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CDKL1Q00532 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CDKL1Q00532 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CDKL1Q00532 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL1Q00532 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL1Q00532 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL1Q00532 FEM1AP3-201ENST00000403722 1741 ntBASIC18.69■□□□□ 0.58
CDKL1Q00532 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CDKL1Q00532 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDKL1Q00532 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CDKL1Q00532 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CDKL1Q00532 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDKL1Q00532 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.68■□□□□ 0.58
CDKL1Q00532 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDKL1Q00532 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDKL1Q00532 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.68■□□□□ 0.58
CDKL1Q00532 NIFKP9-201ENST00000419265 221 ntBASIC18.68■□□□□ 0.58
CDKL1Q00532 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDKL1Q00532 FAM201B-201ENST00000458407 597 ntBASIC18.68■□□□□ 0.58
CDKL1Q00532 RPPH1-201ENST00000516869 333 ntBASIC18.68■□□□□ 0.58
CDKL1Q00532 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CDKL1Q00532 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.68■□□□□ 0.58
CDKL1Q00532 ITM2C-210ENST00000620962 501 ntBASIC18.68■□□□□ 0.58
CDKL1Q00532 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDKL1Q00532 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CDKL1Q00532 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDKL1Q00532 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDKL1Q00532 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
CDKL1Q00532 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDKL1Q00532 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDKL1Q00532 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDKL1Q00532 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDKL1Q00532 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDKL1Q00532 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDKL1Q00532 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CDKL1Q00532 AC018470.1-201ENST00000624790 3129 ntBASIC18.67■□□□□ 0.58
CDKL1Q00532 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL1Q00532 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.67■□□□□ 0.58
CDKL1Q00532 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.67■□□□□ 0.58
CDKL1Q00532 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL1Q00532 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL1Q00532 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL1Q00532 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.67■□□□□ 0.58
CDKL1Q00532 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.67■□□□□ 0.58
CDKL1Q00532 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL1Q00532 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL1Q00532 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.67■□□□□ 0.58
CDKL1Q00532 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.67■□□□□ 0.58
CDKL1Q00532 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CDKL1Q00532 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL1Q00532 AL353807.1-201ENST00000427475 662 ntBASIC18.67■□□□□ 0.58
CDKL1Q00532 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL1Q00532 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.67■□□□□ 0.58
CDKL1Q00532 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.67■□□□□ 0.58
CDKL1Q00532 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL1Q00532 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.67■□□□□ 0.58
CDKL1Q00532 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.67■□□□□ 0.58
CDKL1Q00532 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.67■□□□□ 0.58
CDKL1Q00532 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.67■□□□□ 0.58
CDKL1Q00532 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.67■□□□□ 0.58
CDKL1Q00532 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.67■□□□□ 0.58
CDKL1Q00532 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CDKL1Q00532 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.67■□□□□ 0.58
CDKL1Q00532 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.67■□□□□ 0.58
CDKL1Q00532 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL1Q00532 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.67■□□□□ 0.58
CDKL1Q00532 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL1Q00532 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL1Q00532 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL1Q00532 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL1Q00532 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CDKL1Q00532 AC120498.9-201ENST00000339021 3867 ntBASIC18.67■□□□□ 0.58
CDKL1Q00532 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL1Q00532 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL1Q00532 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CDKL1Q00532 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL1Q00532 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.66■□□□□ 0.58
CDKL1Q00532 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CDKL1Q00532 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL1Q00532 KRT8P41-201ENST00000533985 1514 ntBASIC18.66■□□□□ 0.58
CDKL1Q00532 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL1Q00532 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL1Q00532 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL1Q00532 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.66■□□□□ 0.58
CDKL1Q00532 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.66■□□□□ 0.58
CDKL1Q00532 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CDKL1Q00532 Z85996.1-201ENST00000494644 937 ntBASIC18.66■□□□□ 0.58
CDKL1Q00532 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.66■□□□□ 0.58
CDKL1Q00532 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL1Q00532 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms